New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2457379 = | 92 (1.040) | 5 (0.060) | 7/244 | NT | 5.4% | coding (407/999 nt) | PP_2150 | thiamine biosynthesis lipoprotein |
? | NC_002947 | 2457401 = | 85 (0.970) | coding (429/999 nt) | PP_2150 | thiamine biosynthesis lipoprotein |
CCATGGCCTGCAGGCGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457528‑2457379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCG > NC_002947/2457401‑2457549 CCATGGCCTGCAGGCGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTG > 2:1301822/1‑150 CTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTACTGGTAACCCACACACTGGCCCAGGTGCGCCAGCGTGTGG > 1:343610/1‑88 CTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTACTGGTAACCCACACACTGGCCCAGGTGCGCCAGCGTGTGG < 2:343610/88‑1 TTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACACTGGCCCAGGTGCGCCAGCGTGTGGGTTACCAGCACTTGC < 1:1492851/87‑1 TTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACACTGGCCCAGGTGCGCCAGCGTGTGGGTTACCAGCACTTGC > 2:1492851/1‑87 GCTGGCGCACCTGGGCCAGTGTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGG > 2:192162/1‑150 CTGGCGCACCTGGGCCAGCGTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGT > 1:1901372/1‑77 CTGGCGCACCTGGGCCAGCGTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGT < 2:1901372/77‑1 GTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATAGCCCCTCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCG > 1:23060/1‑150 CCATGGCCTGCAGGCGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457528‑2457379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTGGGTTACCAGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCG > NC_002947/2457401‑2457549 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |