New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4003395 | 86 (0.970) | 6 (0.070) | 6/232 | NT | 6.9% | intergenic (+9/+74) | PP_3531/PP_3532 | hypothetical protein/AsnC family transcriptional regulator |
? | NC_002947 | = 4003419 | 81 (0.970) | intergenic (+33/+50) | PP_3531/PP_3532 | hypothetical protein/AsnC family transcriptional regulator |
CTGGGTGACCGGGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4003240‑4003395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAACT < NC_002947/4003419‑4003271 CTGGGTGACCGGGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGT < 2:794378/150‑1 TGGTTGACCGGGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTCCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGCCGTTGCGTCCGTCGCGAGCGGTGGCTGAGCGCCAACTTTGACGTG > 1:184991/1‑150 GGTCACCGGGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGCGCGGTGGCTGAGCGCCCACCTTGAAGTCCC > 2:1055144/1‑150 GGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGACGGCCggct < 2:2211443/150‑5 CAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGG > 1:1460907/1‑125 CAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGG < 2:1460907/125‑1 TGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCCGG > 1:1168693/1‑115 TGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCCGG < 2:1168693/115‑1 GCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCC < 1:1421182/88‑1 GCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCC > 2:1421182/1‑88 TACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCT > 1:2136364/1‑67 TACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGCCT < 2:2136364/67‑1 TGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCT < 2:1762115/150‑1 TGCCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCT < 1:2092940/150‑1 CCGGCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGC > 2:955038/1‑150 GCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGGCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATGCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAAC > 1:997685/1‑150 GCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGC < 2:1873499/143‑1 GCCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGC > 1:1873499/1‑143 CCCTGCTGCATTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAACT < 1:2211096/150‑1 CTGGGTGACCGGGTGACCGAGGTGACCTACCAGTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4003240‑4003395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcCCTGCTGCAGTCGGTCTGCAGCCTGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAACT < NC_002947/4003419‑4003271 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |