New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4048216 | 84 (0.950) | 8 (0.090) | 7/238 | NT | 8.6% | coding (723/2418 nt) | quiA | quinate dehydrogenase |
? | NC_002947 | = 4048234 | 89 (1.040) | coding (741/2418 nt) | quiA | quinate dehydrogenase |
CGGGACAACGTCAACAAGCTGAAAGTGGCCTGGACCTACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4048064‑4048216 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcTTTGCCGGTGTCGGCATCGAGTGCGATCAGGTTGTTGTGCGGGGTGCAGATGAACACCTTGCTGCCGATCTGCAGCGGG < NC_002947/4048234‑4048156 CGGGACAACGTCAACAAGCTGAAAGTGGCCTGGACCTACCAAACCGGAGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTTTTCATCTGCACCCCGCACAACAACCTGATCGCA > 2:808080/1‑150 GGGACAACGTCAACAAGCTGAAAGTGGCCTGGACCTACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCCGCATAGCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCAC > 1:2331518/1‑150 GACAACGTCAACAAGCTGAAAGTGGCCTGGACCTACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTC < 2:2277762/150‑1 ACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAGTGCGATCA > 1:368674/1‑145 ACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAGTGCGATCA < 2:368674/145‑1 CCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAGTGCGATCA < 1:809505/99‑1 CCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAGTGCGATCA > 2:809505/1‑99 GATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGA > 1:2205846/1‑72 GATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGA < 2:2205846/72‑1 CTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAG < 1:1413856/52‑1 CTGCACCCCGCACAACAACCTGATCGCACTCTTTGCCGGTGTCGGCATCGAG > 2:1413856/1‑52 CTCTTTGCCGGTGTCGGCATCGAGTGCGATCAGGTTGTTGTGCGGGGTGCAGATGAACACCTTGCTGCCGATCTGCAGCGGG < 1:875631/82‑1 CTCTTTGCCGGTGTCGGCATCGAGTGCGATCAGGTTGTTGTGCGGGGTGCAGATGAACACCTTGCTGCCGATCTGCAGCGGG > 2:875631/1‑82 CGGGACAACGTCAACAAGCTGAAAGTGGCCTGGACCTACCAAACCGGCGACGTTGCAATCAGTGACGGCAACGGTGCCGAAGACCAGCTCACCCCGCTGCAGATCGGCAGCAAGGTGTTCATCTGCACCCCGCACAACAACCTGATCGCACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4048064‑4048216 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcTTTGCCGGTGTCGGCATCGAGTGCGATCAGGTTGTTGTGCGGGGTGCAGATGAACACCTTGCTGCCGATCTGCAGCGGG < NC_002947/4048234‑4048156 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |