New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4069837 | 119 (1.340) | 6 (0.070) | 6/232 | NT | 5.7% | coding (2366/3099 nt) | mdtB | multidrug transporter membrane protein |
? | NC_002947 | = 4069885 | 88 (1.050) | coding (2318/3099 nt) | mdtB | multidrug transporter membrane protein |
ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4069686‑4069837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatccACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGCGAA < NC_002947/4069885‑4069737 ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGAT > 1:2228993/1‑150 CCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACACGGTCACAGCCCAGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCC > 1:1132674/1‑150 TTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGC > 1:1793161/1‑150 GATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGTCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCT > 2:59544/1‑150 CGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCTCGGGCGCGGATCGAGCA < 2:1793161/150‑1 GGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGTCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCA < 1:59544/150‑1 TGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATC < 1:1170473/99‑1 TGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATC > 2:1170473/1‑99 CGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACCTCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGG < 2:205057/150‑1 CGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGG < 2:1258107/150‑1 GATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGG > 1:1148608/1‑150 GATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGG < 2:2195532/150‑1 ATCCACGTCAAGGCGACCGGTGGCGGCCAGGTGGGCGTTTCGGCGCTGGCGCGGATCGAGGGGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGC < 2:950572/150‑1 ATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGC < 2:216201/150‑1 CACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGCGAA < 2:1326028/150‑1 ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4069686‑4069837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatccACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGCGAA < NC_002947/4069885‑4069737 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |