New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4731520 = | 126 (1.420) | 7 (0.080) | 7/242 | NT | 5.8% | intergenic (‑31/+63) | lpdG/sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
? | NC_002947 | 4731576 = | 103 (1.180) | intergenic (‑87/+7) | lpdG/sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
CCTGATCGACGGCAAGGAAGCGGTAACCTTCCTGGTCACTATCAAGAACCTGCTGGAAGATCCGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4731670‑4731520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGC > NC_002947/4731576‑4731688 CCTGATCGACGGCAAGGAAGCGGTAACCTTCCTGGTCACTATCAAGAACCTGCTGGAAGATCCGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGG > 2:1334768/1‑150 CTGATCGACGGCAAGGAAGCGGTAACCTTCCTGGTCACTATCAAGAACCTGCTGGAAGATCCGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGC < 1:1867749/150‑1 CGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGC < 1:121309/89‑1 CGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGC > 2:121309/1‑89 CTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTG > 1:1570731/1‑150 TAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCCAGGGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTTACCAGGAAGGTTACCGCTTCCTTGC > 1:1839176/1‑150 CTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCT > 1:1652404/1‑99 CTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCT < 2:1652404/99‑1 TGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATC < 2:1570731/150‑1 ACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGA > 1:464588/1‑150 CTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGC > 2:97522/1‑150 CCTGATCGACGGCAAGGAAGCGGTAACCTTCCTGGTCACTATCAAGAACCTGCTGGAAGATCCGTCCCGCCTGCTGCTGGACATCTAACCCTCTGGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4731670‑4731520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGC > NC_002947/4731576‑4731688 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |