New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 573211996 (1.080)4 (0.050) 4/236 NT 4.0% coding (493/1206 nt) hutI imidazolonepropionase
?NC_002947 = 5732156 101 (1.190)coding (456/1206 nt) hutI imidazolonepropionase
Rejected: Frequency below/above cutoff threshold.

CGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5731967‑5732119
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG  <  NC_002947/5732156‑5732008
                                                                                                                                                                                                                                                                                                              
gGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGT                                                                                                                                                          <  2:1660541/149‑1
  AGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGG                                                                                                                                                        >  1:2013792/1‑150
  AGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGG                                                                                                                                                        <  1:2065040/150‑1
   GAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC                                                                                                                                                       <  2:1286486/150‑1
                                         CCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTG                                                                                                                 <  1:1456263/150‑1
                                         CCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTG                                                                                                                 >  1:818530/1‑150
                                           AGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCC                                                                                                               <  2:818530/150‑1
                                                 TCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGGGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGC                                                                                                         <  2:1407318/150‑1
                                                                                                                                                        CCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG  >  2:1444124/1‑150
                                                                                                                                                                                                                                                                                                              
CGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5731967‑5732119
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG  <  NC_002947/5732156‑5732008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.