New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5732119 | 96 (1.080) | 4 (0.050) | 4/236 | NT | 4.0% | coding (493/1206 nt) | hutI | imidazolonepropionase |
? | NC_002947 | = 5732156 | 101 (1.190) | coding (456/1206 nt) | hutI | imidazolonepropionase | |||||
Rejected: Frequency below/above cutoff threshold. |
CGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5731967‑5732119 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG < NC_002947/5732156‑5732008 gGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGT < 2:1660541/149‑1 AGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGG > 1:2013792/1‑150 AGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGG < 1:2065040/150‑1 GAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC < 2:1286486/150‑1 CCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTG < 1:1456263/150‑1 CCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTG > 1:818530/1‑150 AGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCC < 2:818530/150‑1 TCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGGGCGCCGCCAGGCACGTGGCCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGC < 2:1407318/150‑1 CCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG > 2:1444124/1‑150 CGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACCCGCGTACTCCGGGGGCAAAGCGTGCGCCGCCAGGCACGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5731967‑5732119 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcCCGCCGCCTGGCCGACGAGCTGCCGCTGACGGTGCGTGCCACGTGCCTGGCGGCGCACGCTTTGCCCCCGGAGTACGCGGGTCGGGCCGACGACTACATCGCGCACATCTGTGACGAGATGTTGCCGGCCTTGGCCGGCGAAGGCCTGG < NC_002947/5732156‑5732008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |