| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5873258 | 82 (0.930) | 4 (0.050) | 4/232 | NT | 4.8% | intergenic (‑48/‑94) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase |
| ? | NC_002947 | = 5873279 | 83 (0.990) | intergenic (‑69/‑73) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5873109‑5873258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcttgGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGTTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCTCGAC < NC_002947/5873279‑5873132 TTGCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCCCCTGCCCGGCATCATTCTTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAGCCTCGCAAACTCATGTCACCGCATTGTTCCACAAAGCTTG < 1:793341/150‑1 AGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTT > 1:291541/1‑144 AGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTT < 2:291541/144‑1 CATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTG < 1:1549669/149‑1 CATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTG > 2:1549669/1‑149 AACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTT < 1:111464/71‑1 AACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGGCGGGCGCGTTGCTGCGATCGCAAGCTTT > 2:111464/1‑71 AGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGGTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCT < 1:523266/150‑1 GCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGTTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCTC < 1:2156983/150‑1 TGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGTTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCTCGAC < 1:1850898/150‑1 TGGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGTTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCTCGAC < 2:1764958/150‑1 TTGCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5873109‑5873258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcttgGCGGGCGCGTTGCTGCGCTCGCAAGCTTTGTGGAACAATGCGTTGACATGCGTTTGCGAGGTTGCTGCCGTGATCGACCCGGATGGTTTTCGCCCCAATGTCGGGATCATTCTCACGAATGATGCCGGGCAGGTGCTATGGGCTCGAC < NC_002947/5873279‑5873132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |