| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6079681 | 91 (1.030) | 3 (0.040) | 5/232 | NT | 3.3% | coding (39/399 nt) | PP_5331 | acyl‑CoA thioesterase |
| ? | NC_002947 | = 6079687 | 88 (1.050) | coding (45/399 nt) | PP_5331 | acyl‑CoA thioesterase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6079531‑6079681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcCAGGTCGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGATTCAGCTTGAAACATACTACGCCGATTTCGTTT < NC_002947/6079687‑6079549 CCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGG > 1:1400123/1‑150CCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGG < 1:2050357/150‑1 CCTACGGCCGCCCAGTGAAACGAAATCTGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGGC < 1:556054/150‑1 CCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGGC > 1:501133/1‑150 CAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGGCCAGGTCGCCTTG < 1:130003/150‑1 GAACAAGAAGATCCAATCCCGCAAGGCGACCTGGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGA < 1:1207231/133‑1 GAACAAGAAGATCCAATCCCGCAAGGCGACCTGGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGA > 2:1207231/1‑133 TCCCGCAAGGCGACCTGGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGA > 1:1697018/1‑60 TCCCGCAAGGCGACCTGGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGA < 2:1697018/60‑1 GGCCAGGTCGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGATTCAGCTTGAAACATACTACGCCGATTTCGTTT > 1:1584814/1‑142 GGCCAGGTCGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGATTCAGCTTGAAACATACTACGCCGATTTCGTTT < 2:1584814/142‑1 CCCTACGGCCGCCCAGTGAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGAAGATCCAATCCCGCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6079531‑6079681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcCAGGTCGCCTTGCGGGATTGGATCTTCTTGTTCGAGCTCAATCATGCGATGGGGCCTCTGACCCGTGACGCTTTTCGTTGGTGTGGCGCAAAGGCCGGGTAAACGATTCAGCTTGAAACATACTACGCCGATTTCGTTT < NC_002947/6079687‑6079549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |