| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,450,173 | C→G | 11.4% | A68G (GCC→GGC) | nicA → | nicotinate dehydrogenase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,450,173 | 0 | C | G | 11.4% | 265.6 / 24.1 | 97 | A68G (GCC→GGC) | nicA | nicotinate dehydrogenase subunit A |
| Reads supporting (aligned to +/- strand): ref base C (39/47); new base G (6/5); total (45/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.48e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
ATGCCTGACACCCCGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCA > NC_002947/4450025‑4450322 | aTGCCTGACACCCCGCTGCTGCTGATCCTGCGCAACGACCTCTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGgcgcg < 2:1649859/150‑2 (MQ=255) cTGACACCCCGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGccgccg < 2:2028329/150‑1 (MQ=255) acCCCGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGGCgccggccaa < 1:1294306/150‑3 (MQ=255) acCCCGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCCGCGTCATCCCCTTGGCCGGCGGCgccggccaa < 1:993226/150‑3 (MQ=255) ccccGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGGCgccggccaag < 2:1847497/150‑4 (MQ=255) ccccGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTCGGCCGGCGGCgccggccaag < 1:1218890/150‑4 (MQ=255) cccGCTGCTGCTGATCCTGCGTAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCaa > 1:1557503/1‑150 (MQ=255) gctgctgctGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAatat > 1:438190/1‑150 (MQ=255) tgctgctgATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATca < 2:1751508/150‑1 (MQ=255) ctgATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCaccacc > 2:1433502/1‑150 (MQ=255) tgATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCAccc > 2:145851/1‑150 (MQ=255) tCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCg > 1:921954/1‑150 (MQ=255) cTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGaa > 1:2380917/1‑150 (MQ=255) tGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAg > 1:1124379/1‑150 (MQ=255) cgcAACGACCTGTGCCTGAACGTCCCCAAGTACGGCTGCGCCCTGGCCGAATGCGGTGCTTCTACGGTGATCATCGACTGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAggg < 2:1196920/150‑1 (MQ=255) aaCGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGGCgccggccaag > 1:919960/1‑124 (MQ=255) aaCGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGGCgccggccaag < 2:919960/127‑4 (MQ=255) aaCGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCAGGCCGCAATATCACCACCCTCGAAGGGCTg < 1:444115/150‑1 (MQ=255) aCCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgca < 2:1899489/150‑1 (MQ=255) aCCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgca < 1:1767461/150‑1 (MQ=255) ccTGTGCCTGAACGGCCCCAAGTACGGCTTCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgcag > 1:1874184/1‑150 (MQ=255) cTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCgccgg > 2:2235045/1‑116 (MQ=255) cTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCgccgg < 1:2235045/116‑1 (MQ=255) tgtgCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgcagca > 2:43761/1‑150 (MQ=255) tgtgCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgcagca > 2:1383248/1‑150 (MQ=255) gtgCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCaa < 2:1630516/150‑1 (MQ=255) tGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGccg > 2:1635279/1‑150 (MQ=255) aaCGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAat > 2:2409092/1‑114 (MQ=255) ccAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCGCCACCCTCGAAGGGCTGGGCAGCAAGGCCgcaccgcacc > 1:22854/1‑150 (MQ=255) ccAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTgg < 2:2307112/129‑1 (MQ=255) ccAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTgg > 1:2307390/1‑129 (MQ=255) ccAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTgg > 1:2307112/1‑129 (MQ=255) ccAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTgg < 2:2307390/129‑1 (MQ=255) cAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCAccc > 1:1074306/1‑150 (MQ=255) aaGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTg < 1:381454/126‑1 (MQ=255) aaGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTg > 2:381454/1‑126 (MQ=255) ttACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGGCGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCTGCGCCGCCGGCCGCAATATCACCTCCCGCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGt < 1:797130/149‑1 (MQ=255) gTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATCTCAACAACCACGAAGAGCTGGGCAGCAAGGCCGCACCGCACCCCGt > 2:2323151/1‑150 (MQ=255) gTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgca < 1:1813647/128‑1 (MQ=255) gTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGgca > 2:1813647/1‑128 (MQ=255) tGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAg < 2:1124379/150‑1 (MQ=255) gCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGGGGCCGCCCGCTCCTGGATCATCCCCTTGTCCTGCGCCTCCGTCCGCAATATCTCCCTCCTCGTAGCGCTGGGCAGCAAGGCCGCAACGCACCCCGTGTAACAgg > 2:1025064/1‑150 (MQ=255) cGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCCCCACCGCCGGACGCAATTGCACCGCCCTTTTAATGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGc < 1:45747/150‑1 (MQ=255) gCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATGCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGt < 1:168186/150‑1 (MQ=255) gCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGt < 1:556735/150‑1 (MQ=255) gCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGt < 2:921954/150‑1 (MQ=255) tGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTg < 1:869653/137‑1 (MQ=255) tGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTg > 2:869653/1‑137 (MQ=255) gggCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCTGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCAt < 1:1760049/150‑1 (MQ=255) gggCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCAt < 1:190796/150‑1 (MQ=255) gggCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCAt < 2:1557503/150‑1 (MQ=255) gggCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGCACGGCTCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCAt < 1:1731532/150‑1 (MQ=255) gCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAg < 1:1379554/116‑1 (MQ=255) gCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAg > 2:1379554/1‑116 (MQ=255) cGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCaa > 2:211851/1‑114 (MQ=255) cGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCaa < 1:211851/114‑1 (MQ=255) gAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGcgccgc < 2:25928/74‑1 (MQ=255) gAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGcgccgc > 1:25928/1‑74 (MQ=255) gAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATcgac < 1:2309479/150‑1 (MQ=255) gAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATcgac > 1:1041005/1‑150 (MQ=255) gAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATcgac < 2:1874184/150‑1 (MQ=255) aTGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATcgacga < 2:163157/150‑1 (MQ=255) gCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGc < 2:462649/150‑1 (MQ=255) gtgtACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAggcggc > 1:73788/1‑150 (MQ=255) tGATCATCGACGGCGTGGCCGCTCGCTCCTGCGTCACCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCGCCCTCGTGGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAGGAGGCGTTCATCGACGAGCAGGCGGCCCAGtgtg < 2:1768402/150‑1 (MQ=255) tGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGtgtg < 1:1433502/150‑1 (MQ=255) gATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCCCCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTgg < 2:1782940/150‑1 (MQ=255) tcatcGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGtt > 2:1529794/1‑150 (MQ=255) ctcGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTAc < 1:288056/149‑1 (MQ=255) gACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGAGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGc > 2:1491646/1‑150 (MQ=255) aCGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGcc < 2:1654231/150‑2 (MQ=255) cGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCAt < 1:1635279/150‑1 (MQ=255) gTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAAc < 2:966954/150‑1 (MQ=255) gTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAAc < 1:2323151/150‑1 (MQ=255) ggCCGCCCTCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACgg < 1:1553411/150‑1 (MQ=255) ggCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACgg > 2:1736667/1‑150 (MQ=255) gccgccCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGc > 1:1897713/1‑150 (MQ=255) gccgccCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGc < 2:1038987/150‑1 (MQ=255) ccgcccgcTCCTCCGTCATACCTCTAGCCGGTGCCGCCGGCCGCAATAACACCACCCTCCAAGGGTTTCACATCAAGGCCGCACCGCACCCCGTGCAACAGGCGTGCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCa < 1:42809/150‑1 (MQ=255) cgcTCCTGCGTCAGCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATc < 2:964747/150‑1 (MQ=255) ccTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGa < 2:1897713/150‑1 (MQ=255) aTCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAg > 2:571238/1‑150 (MQ=255) aTCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACAGcacag > 1:2042882/1‑146 (MQ=255) attgcggCCGGCGGCGCCGGCCACAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGcc > 1:247607/6‑150 (MQ=255) ccTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCAt > 2:2021794/1‑136 (MQ=255) ccTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCAt < 1:2021794/136‑1 (MQ=255) ccTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGAcc > 1:884598/1‑140 (MQ=255) ccTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGAcc < 2:884598/140‑1 (MQ=255) ccTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGccc > 2:707575/1‑150 (MQ=255) cTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCt > 2:1589178/1‑150 (MQ=255) gcggCCGGCGGCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCCCGAAGGCCCTg > 1:166164/3‑150 (MQ=255) cggCCGGCGGCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGc > 1:1390010/2‑150 (MQ=255) gCCGGCGGCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTc > 1:1433075/1‑150 (MQ=255) gCCGGCGGCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTc > 2:88471/1‑150 (MQ=255) gCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCCCCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTc < 1:1383248/150‑1 (MQ=255) ccGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCg > 2:2246502/1‑150 (MQ=255) ggCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGAt < 1:145851/150‑1 (MQ=255) ggCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCG‑CAAGGCCCTGCTCGATc < 1:1736667/150‑1 (MQ=255) gcgcCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATc < 2:2380917/150‑1 (MQ=255) ccgccgGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCa < 2:438190/150‑1 (MQ=255) | ATGCCTGACACCCCGCTGCTGCTGATCCTGCGCAACGACCTGTGCCTGAACGGCCCCAAGTACGGCTGCGGCCTGGGCGAATGCGGGGCGTGTACGGTGATCATCGACGGCGTGGCCGCCCGCTCCTGCGTCATCCCCTTGGCCGGCGCCGCCGGCCGCAATATCACCACCCTCGAAGGGCTGGGCAGCAAGGCCGCACCGCACCCCGTGCAACAGGCGTTCATCGACGAGCAGGCGGCCCAGTGTGGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCA > NC_002947/4450025‑4450322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |