BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	783,242	T→C	8.0%	D896G (GAC→GGC)	PP_0672 ←	sensory box protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	783,242	0	T	C	8.0%	315.5 / 12.9	114	D896G (GAC→GGC)	PP_0672	sensory box protein
Reads supporting (aligned to +/- strand): ref base T (48/56); new base C (4/5); total (53/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01

Only 100 of 114 total aligned reads displayed.

GGCCACGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGTTGGGCAGGT  >  NC_002947/783094‑783386

ggCCACGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTc                                                                                                                                                 <  2:657066/150‑1 (MQ=255)

 gCCACGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCg                                                                                                                                                >  1:1135253/1‑150 (MQ=255)

  ccACGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCgc                                                                                                                                               <  2:807075/150‑1 (MQ=255)

    aCGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCgccg                                                                                                                                             >  2:608826/1‑150 (MQ=255)

       tGGATGGCGCGTTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCgccggcc                                                                                                                                          >  2:228845/1‑150 (MQ=255)

         gATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGc                                                                                                                                        >  1:1128230/1‑150 (MQ=255)

          aTGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAAGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCa                                                                                                                                       <  2:398794/150‑1 (MQ=255)

             gcgcGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATgg                                                                                                                                    >  1:2346516/1‑150 (MQ=255)

              cgcgGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCCTGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGc                                                                                                                                   <  1:1535394/150‑1 (MQ=255)

                 ggTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGCCGGCGACCGCATgctcaa                                                                                                                                <  1:776204/150‑6 (MQ=255)

                  gTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAg                                                                                                                               >  1:2371131/1‑150 (MQ=255)

                   ttCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAgg                                                                                                                              <  2:795264/150‑1 (MQ=255)

                   ttCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAgg                                                                                                                              <  2:321413/150‑1 (MQ=255)

                   ttCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAgg                                                                                                                              <  1:980834/150‑1 (MQ=255)

                       gggCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCGGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGt                                                                                                                          >  2:935696/1‑150 (MQ=255)

                         gCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCg                                                                                                                        <  1:1972862/150‑1 (MQ=255)

                          ccATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCGTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGt                                                                                                                       <  1:1666920/150‑1 (MQ=255)

                           cATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGtt                                                                                                                      >  1:1588046/1‑150 (MQ=255)

                            aTTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAgg                                                                                                                              <  1:2371595/141‑1 (MQ=255)

                            aTTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAgg                                                                                                                              >  2:2371595/1‑141 (MQ=255)

                            aTTTCACGGGTGGGGCGCGGTTGCAACAACAGGGTGAACTCGTAGCCGCACATGCGTGACACAGTGTAGTCGTCATACACGCAGACCAGCAAGAGCAGGGCCATGTTCTTGAGCCTGCGGTCGCAGGCCGCATGCGCGAGGGGGTCGttt                                                                                                                     >  2:568699/1‑149 (MQ=255)

                               tCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCTATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATc                                                                                                                  <  2:243383/150‑1 (MQ=255)

                               tCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATc                                                                                                                  <  1:473930/150‑1 (MQ=255)

                                   gggTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGtt                                                                                                              >  2:1537871/1‑150 (MQ=255)

                                   gggTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGtt                                                                                                              <  2:507990/150‑1 (MQ=255)

                                   gggTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGtt                                                                                                              <  1:1481750/150‑1 (MQ=255)

                                    ggTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGttt                                                                                                             <  2:1128230/150‑1 (MQ=255)

                                    ggTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCAAACAGATCAGCAGGCGCAGGGCAATGTCATTGCGTAATCTGGCGCCGGCCGCATGGCCGAGGGAGTCGGTGATCGGttt                                                                                                             >  1:541673/1‑150 (MQ=255)

                                       ggggCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGaa                                                                                                          <  1:2199473/150‑1 (MQ=255)

                                       ggggCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCAACCCTGACGGCAAACAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGaa                                                                                                          >  2:1289239/1‑150 (MQ=255)

                                         ggCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGGGTGCCACCGTGGCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGGCGTTGATCGGTTTGAAGc                                                                                                        >  1:552572/1‑150 (MQ=255)

                                         ggCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCgccggcc                                                                                                                                          <  2:1332748/116‑1 (MQ=255)

                                          gcgcGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGAt                                                                                                                   >  1:945878/1‑138 (MQ=255)

                                          gcgcGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCg                                                                                                       >  2:1496959/1‑150 (MQ=255)

                                          gcgcGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCg                                                                                                       <  1:608826/150‑1 (MQ=255)

                                               gTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCggtcga                                                                                                  <  1:228845/150‑1 (MQ=255)

                                                ttGCAGCAACGGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCggtcgag                                                                                                 <  1:1322417/150‑1 (MQ=255)

                                                     gcaACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCggtcgaggtcga                                                                                            <  1:1042930/150‑1 (MQ=255)

                                                     gcaACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCggtcgaggtcga                                                                                            >  2:1572589/1‑150 (MQ=255)

                                                      caACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATTTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGgtcgaggtcgag                                                                                           <  1:1496959/150‑1 (MQ=255)

                                                      caACAGGGGGAACTCGTCGCAGCTCACGCGTCCCCCGCTGTCGGCTTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCTgtccaggtcgag                                                                                           <  2:872909/150‑1 (MQ=255)

                                                       aaCAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGTCGGCCGCATGGCCGAGGGAGTCGTCGATGGGTTTGAAGCGGtcgaggtcgagg                                                                                          >  1:1576292/1‑150 (MQ=255)

                                                          aGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAAc                                                                                       <  2:595754/150‑1 (MQ=255)

                                                            ggTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGgtcgaggtcgag                                                                                           >  2:1453873/1‑144 (MQ=255)

                                                            ggTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGgtcgaggtcgag                                                                                           <  1:1453873/144‑1 (MQ=255)

                                                             gTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATc                                                                                    <  1:536170/150‑1 (MQ=255)

                                                                  cTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGaa                                                                                                          >  1:446146/1‑123 (MQ=255)

                                                                  cTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGaa                                                                                                          <  2:446146/123‑1 (MQ=255)

                                                                   tcgtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAg                                                                                  >  2:857460/1‑146 (MQ=255)

                                                                    cgtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGcacca                                                                             <  2:541673/150‑1 (MQ=255)

                                                                     gtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTTGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACAt                                                                                     >  1:279745/1‑141 (MQ=255)

                                                                     gtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTTGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACAt                                                                                     <  2:279745/141‑1 (MQ=255)

                                                                     gtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATc                                                                                                                  <  1:543611/112‑1 (MQ=255)

                                                                     gtcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATc                                                                                                                  >  2:543611/1‑112 (MQ=255)

                                                                      tcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGtt                                                                                                              <  2:190618/115‑1 (MQ=255)

                                                                      tcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGtt                                                                                                              >  1:190618/1‑115 (MQ=255)

                                                                      tcgCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCACAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCaccacc                                                                           >  1:1369411/1‑150 (MQ=255)

                                                                         ccgccCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAg                                                                        <  1:1723534/150‑1 (MQ=255)

                                                                           gccCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGc                                                                      >  2:2260086/1‑150 (MQ=255)

                                                                             ccATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGca                                                                                <  2:1903900/138‑1 (MQ=255)

                                                                              cATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCTAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGAAGAGGTAGAGGAACATCACACCCACCGAggtcgg                                                                   >  2:1944010/1‑146 (MQ=255)

                                                                               aTGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTc                                                                  >  1:983215/1‑150 (MQ=255)

                                                                                tGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCt                                                                 <  1:625852/150‑1 (MQ=255)

                                                                                      ccACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGcacc                                                                              >  2:516642/1‑131 (MQ=255)

                                                                                      ccACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGcacc                                                                              <  1:516642/131‑1 (MQ=255)

                                                                                      ccACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCt                                                           >  1:1727860/1‑150 (MQ=255)

                                                                                       cACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATgg                                                                                                                                    <  1:2371956/76‑1 (MQ=255)

                                                                                       cACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATgg                                                                                                                                    >  2:2371956/1‑76 (MQ=255)

                                                                                       cACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATAGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTc                                                          >  1:1683394/1‑150 (MQ=255)

                                                                                            tgtCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCct                                                     >  1:343500/1‑150 (MQ=255)

                                                                                              tcgtcgtcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCctgc                                                   >  1:2384012/1‑150 (MQ=255)

                                                                                                gtcgtcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGt                                                                                                                       <  2:941689/80‑1 (MQ=255)

                                                                                                gtcgtcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGt                                                                                                                       >  1:941689/1‑80 (MQ=255)

                                                                                                 tcgtcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGgtcgaggtcgag                                                                                           <  2:1034386/107‑1 (MQ=255)

                                                                                                 tcgtcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTAGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGgtcgaggtcgag                                                                                           >  1:1034386/1‑107 (MQ=255)

                                                                                                    tcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAgg                                             <  1:1162912/150‑1 (MQ=255)

                                                                                                    tcATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAgg                                             >  2:357054/1‑150 (MQ=255)

                                                                                                    tcATCCACGCAGGCCAGCAGGCACAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAgg                                             <  2:1369411/150‑1 (MQ=255)

                                                                                                       tCCACGCAGGGCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACa                                                                                      <  1:1837620/106‑1 (MQ=255)

                                                                                                       tCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACa                                                                                      >  2:1837620/1‑106 (MQ=255)

                                                                                                         cACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCCTGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGtt                                        <  1:1944010/150‑1 (MQ=255)

                                                                                                         cACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGc                                                                                 <  1:588613/109‑1 (MQ=255)

                                                                                                         cACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGc                                                                                 >  2:588613/1‑109 (MQ=255)

                                                                                                         cACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGtt                                        <  2:1588046/150‑1 (MQ=255)

                                                                                                         cACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGtt                                        <  1:28152/150‑1 (MQ=255)

                                                                                                            gCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGt                                                                                                               <  2:1913047/76‑1 (MQ=255)

                                                                                                            gCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGt                                                                                                               >  1:1913047/1‑76 (MQ=255)

                                                                                                                   agcagGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACgg                              <  1:1982113/150‑1 (MQ=255)

                                                                                                                               gCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACGGTCGGTCCTGGAACAgt                  <  1:1289239/150‑1 (MQ=255)

                                                                                                                                   tGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGc              <  1:935696/150‑1 (MQ=255)

                                                                                                                                       ctcggccATGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCt                          >  1:2252931/7‑134 (MQ=255)

                                                                                                                                       ctcggccATGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCt                          <  2:2252931/128‑1 (MQ=255)

                                                                                                                                       ctcggccATGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTg                         >  2:536738/7‑135 (MQ=255)

                                                                                                                                       cTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGtt          >  2:408934/1‑150 (MQ=255)

                                                                                                                                        ttGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGTTg         <  2:1135253/150‑1 (MQ=255)

                                                                                                                                              aTGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTg                                       >  1:1460562/1‑114 (MQ=255)

                                                                                                                                              aTGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTg                                       <  2:1460562/114‑1 (MQ=255)

                                                                                                                                              aTGCGGCCGGCGACCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTg                         >  1:118584/1‑128 (MQ=255)

                                                                                                                                               tGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGTTGGGCAGGt  >  1:213138/1‑150 (MQ=255)

                                                                                                                                               tGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGTTGGGCAGGt  <  1:1457245/150‑1 (MQ=255)

GGCCACGTGGATGGCGCGGTTCAGGGCCATTTCACGGGTGGGGCGCGGTTGCAGCAACAGGGTGAACTCGTCGCCGCCCATGCGTGCCACCGTGTCGTCGTCATCCACGCAGGCCAGCAGGCGCAGGGCCATGTCCTTGAGCATGCGGTCGCCGGCCGCATGGCCGAGGGAGTCGTTGATCGGTTTGAAGCGGTCGAGGTCGAGGAACATCAGCACCACCCAGGCCTTCTGCCGCTCGGCCTGCTGCAGGGCGTTGTACAAACGGTCCTGGAACAGTGTGCGGTTGGGCAGGT  >  NC_002947/783094‑783386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`