| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2236962 = | 44 (0.980) | 9 (0.230) | 9/232 | 3.2 | 18.4% | intergenic (+14/+114) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter |
| ? | NC_002947 | 2237053 = | 41 (1.040) | intergenic (+105/+23) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2237125‑2236962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCA > NC_002947/2237053‑2237194 TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGC > 2:199102/1‑150 ACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCT > 2:42285/1‑150 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCC > 2:585313/1‑150 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCACGCTCC < 2:15740/150‑1 AAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACA > 1:643795/1‑150 ATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACA < 1:449596/116‑1 ATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACA > 2:449596/1‑116 GCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGCCCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCC > 2:54071/1‑150 GGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGG < 1:434806/150‑1 GGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGG > 2:434806/1‑150 GGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAG > 1:59376/1‑150 CCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACC > 1:663619/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCG > 2:982619/1‑150 ACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGCCCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATG < 1:54071/150‑1 CGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCT < 2:59376/150‑1 CCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCTGTTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGA > 2:818188/1‑150 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA > 1:448502/1‑150 TCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGAT > 1:463715/1‑150 CCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCA > 2:468126/1‑150 ACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCG < 1:829353/61‑1 ACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCG > 2:829353/1‑61 GGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCAC < 2:283046/79‑1 GGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCAC > 1:283046/1‑79 TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2237125‑2236962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCA > NC_002947/2237053‑2237194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |