| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 4,715,246 | Δ48 bp | coding (431‑478/1932 nt) | PP_4173 → | two‑component system sensor histidine kinase/response regulator |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 4715246 | 4715293 | 48 | 54 [0] | [0] 53 | PP_4173 | two‑component system sensor histidine kinase/response regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4715245 | 0 (0.000) | 53 (1.180) | 43/264 | 0.2 | 100% | coding (430/1932 nt) | PP_4173 | two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | 4715294 = | 0 (0.000) | coding (479/1932 nt) | PP_4173 | two‑component system sensor histidine kinase/response regulator | |||||
CACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4715098‑4715245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTCAAGG > NC_002947/4715294‑4715428 CACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGT > 1:1107539/1‑150 ACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTC > 2:821238/1‑150 ATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAG > 2:740998/1‑150 ATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAG > 2:747126/1‑150 TCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGC > 2:295433/1‑150 CCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCG > 1:1128233/1‑150 TGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGC > 2:524848/1‑149 TGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGC < 1:524848/149‑1 GTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCA < 2:756715/150‑1 CAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGCCTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTG < 2:526994/150‑1 CGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAA > 1:474702/1‑150 CGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCAAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAA > 2:445270/1‑150 GAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGC < 2:20110/124‑1 GAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGC > 1:19991/1‑124 GAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGC > 1:20110/1‑124 GAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGC < 2:19991/124‑1 AGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGA > 1:177848/1‑131 AGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGA < 2:177848/131‑1 ACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGG < 1:747126/150‑1 CCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGC < 2:395448/150‑1 CAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTC < 2:918382/150‑1 AGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGT > 1:423243/1‑150 TTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCGGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACC < 1:295433/150‑1 GGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCC < 1:938939/133‑1 GGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCC > 2:938939/1‑133 GCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCT > 2:74300/1‑150 GCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCT < 2:261656/150‑1 GCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCG > 1:805395/1‑110 GCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCG < 2:805395/110‑1 CTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGC > 1:1007953/1‑150 GCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATC > 2:18497/1‑74 GCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATC < 1:18497/74‑1 CTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGA < 1:925864/76‑1 CTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGA > 2:925864/1‑76 ACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGC < 1:756509/150‑1 CGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCC > 2:171521/1‑150 CGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCC > 1:975768/1‑150 ACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGA < 1:74300/150‑1 TTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATC > 2:1068222/1‑150 TTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATC < 2:1128233/150‑1 CCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCT < 2:166094/111‑1 CCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCT > 1:166094/1‑111 CTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGC < 1:445270/150‑1 CTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGC > 1:23726/1‑150 ACAGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACAT > 2:917498/1‑150 AGGGCAAAGCCACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGG < 1:821238/150‑1 ACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTC > 1:683607/1‑150 ACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTC > 1:19435/1‑150 ACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGA > 2:280315/1‑112 ACCAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGA < 1:280315/112‑1 CAGCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTCAA < 2:23726/150‑1 GCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTCAAGG < 2:474702/150‑1 GCCCGGCCATCGGTGGTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTCAAGG < 1:1068222/150‑1 CACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4715098‑4715245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCAGCGCCAGCAGGAAATCGTGATCAAGGCCGGAATCCTGGCGTTGTTCGCCCTGCTGTTCACCTTCTTGCTGGCACGCCGCCTGGCCCTGAGCCTGGCCAAGCCGATCAGCGACATGGGCCATGCGGTCAAGG > NC_002947/4715294‑4715428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |