| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2474183 | 23 (0.510) | 11 (0.300) | 11/218 | 2.5 | 36.1% | intergenic (‑45/+135) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| ? | NC_002947 | = 2474205 | 20 (0.540) | intergenic (‑67/+113) | PP_2167/tal | PhoD‑like phosphatase/transaldolase | |||||
GGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGC > NC_002947/2474041‑2474332 | ggTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGTTTCCAGGCGGCGCAGTCCTCGGTCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACa < 1:300773/150‑1 (MQ=255)ggTTGGGCAGTGACGAGCCAGGCGGCCAGACGCCTGGGTTACAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCCATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACa < 2:513648/150‑1 (MQ=255) gggTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGa > 1:223575/1‑150 (MQ=255) ctgACGAGGCAGCCGGCCCGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgat < 2:635209‑M1/149‑17 (MQ=255) aCGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGCTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTa < 1:380119/150‑1 (MQ=255) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggc > 1:1050515‑M1/1‑126 (MQ=255) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggc < 1:415523‑M1/150‑25 (MQ=255) agacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcgg < 2:1050515‑M1/150‑27 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcgggctt < 2:1005470‑M1/150‑31 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAgcgggcaa > 2:223575‑M2/1‑142 (MQ=255) ccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGCGGGGAACACGGTCAGCTTGCCGTTGTC‑ACAGCTAGGGTGGCTAGCGCGGCCTCTTCGCGGGCAACCCCGCCCTTACAGCGATCAGTGTAGGAGCGGGCTTGc < 1:828462/150‑1 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGAt > 2:597813/1‑114 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGAt < 1:597813/114‑1 (MQ=255) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCgag > 2:1074121/1‑150 (MQ=255) aCCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcg > 2:520227‑M1/1‑89 (MQ=255) aCCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcg < 1:520227‑M1/114‑26 (MQ=255) gggCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcgggcttgc < 2:690871‑M1/101‑33 (MQ=255) gggCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagggcgggcttgc > 1:690871‑M1/1‑69 (MQ=255) ggAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCGGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATa < 2:1032952/150‑1 (MQ=255) gAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCgggaagtgt > 2:527902/1‑143 (MQ=255) gACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGt < 2:112436/116‑1 (MQ=255) gACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGt > 1:112436/1‑116 (MQ=255) tCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagg < 1:15626‑M1/60‑23 (MQ=255) tCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCtcctacactgatcgatgtaagg > 2:15626‑M1/1‑38 (MQ=255) tCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAgc > 1:1114196‑M2/1‑60 (MQ=255) tCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAgc < 2:1114196‑M2/62‑3 (MQ=255) gTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTc > 1:1036565/1‑150 (MQ=255) tATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCGCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAacac > 1:533031/1‑133 (MQ=255) tATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAacac < 2:533031/133‑1 (MQ=255) ggcggcCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTGGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt > 2:268041/1‑124 (MQ=255) ggcggcCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTGGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:268041/124‑1 (MQ=255) gcggcCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAaca > 2:530799/1‑150 (MQ=255) gcCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAGCGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGa < 1:1074121/150‑1 (MQ=255) gCAAGCCCGCCCTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgccc > 1:690871‑M2/1‑32 (MQ=255) gCAAGCCCGCCCTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgccc < 2:690871‑M2/101‑70 (MQ=255) gCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGAGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGc > 2:319316/1‑150 (MQ=255) ttgccCGCtcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggtactgcgccgcctggaaccccagcgtctggcc > 2:223575‑M1/3‑8 (MQ=255) aaGCCCGCCCTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggtactgcgccgcctggaaccccagcgtctggcc < 2:1005470‑M2/150‑121 (MQ=255) cccgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAAGCAAACACGAACTGTATTAGGCCtttt > 2:803933/1‑150 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggtactgcgccgcctggaaccccagcgtctggccgtct < 2:1050515‑M2/150‑125 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 2:213341/1‑150 (MQ=255) cgcccTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggt > 2:520227‑M2/1‑25 (MQ=255) cgcccTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggt < 1:520227‑M2/114‑90 (MQ=255) gcccTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggtactgcgccgcctggaaccccagcgtctggccgtctgg < 1:415523‑M2/150‑127 (MQ=255) gcccTTACATCGATCAGTGTAGGAgcgggcttgcccgcgaacaggccgccatagccacccgagctgtcgatgacctcccctaacccgttgcccctcgttctcgccggcccggtactgcgccgcctggaaccccagcgtctggccgtctgg > 1:1050515‑M2/1‑24 (MQ=255) gCtcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccgccatagccacccga < 2:1114196‑M1/62‑61 (MQ=255) gCtcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccgccatagccacccga > 1:1114196‑M1/1‑2 (MQ=255) cccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGc > 1:167359/1‑150 (MQ=255) | GGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAG‑GGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGC > NC_002947/2474041‑2474332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |