New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 489644326 (0.580)19 (0.500) 12/222 2.3 40.9% intergenic (+31/‑177) PP_4304/sbp‑I VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
?NC_002947 = 4896490 33 (0.870)intergenic (+78/‑130) PP_4304/sbp‑I VIC family cation transporter/sulfate ABC transporter substrate‑binding protein

CCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCC  >  NC_002947/4896294‑4896592
                                                                                                                                                     |                                                                                                                                                     
ggcggtgaagagttttttcacgttgcgtccttgttcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTaaa                                                                                                                                                       <  2:133107‑M1/21‑1 (MQ=255)
     gCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGc                                                                                                                                                  >  1:1061829/1‑150 (MQ=255)
     gCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGc                                                                                                                                                  <  1:141160/150‑1 (MQ=255)
      ccATGCGTGGGGAGCAGCAGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCt                                                                                                                                                 <  1:841480/150‑1 (MQ=255)
         tGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCt                                                                                                                                              >  2:229543/1‑150 (MQ=255)
                   acgttgcgtccttgttcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGCgg                                                                                                                                    <  1:495884‑M1/40‑1 (MQ=255)
                           agcaTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTgcg                                                                                                                            >  1:383176/1‑150 (MQ=255)
                                gttcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGcgcg                                                                                                                          >  2:24582‑M1/98‑147 (MQ=255)
                                gttcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGcgcg                                                                                                                          <  1:24582‑M1/50‑1 (MQ=255)
                                  ttGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTTGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCCCCTCAATCCGCCCCTACATGCGCGGACCGTGCGCGGTgcc                                                                                                                     >  1:1113194/1‑150 (MQ=255)
                                  ttGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTccc                                                                                                                     >  2:802273/1‑150 (MQ=255)
                                       aagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctacctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTa                                                                                                                <  1:749854‑M1/60‑1 (MQ=255)
                                          ggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGa                                                                                                             >  2:495884‑M1/88‑150 (MQ=255)
                                            tGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCGCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           <  1:352278‑M1/150‑45 (MQ=255)
                                              ttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttccgcctgcGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCgg                                                                                                         <  1:68488‑M1/67‑1 (MQ=255)
                                              ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           >  2:420525‑M1/1‑104 (MQ=255)
                                              ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           <  1:420525‑M1/148‑45 (MQ=255)
                                              ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCgg                                                                                                         <  1:872959/150‑1 (MQ=255)
                                              ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCgg                                                                                                         <  1:573588/150‑1 (MQ=255)
                                               cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggacagcgcacggtccgcgcctgtaggagcgga                                                                                                        <  1:203042‑M1/150‑48 (MQ=255)
                                               cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcgga                                                                                                        <  2:797886‑M1/150‑48 (MQ=255)
                                               cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCggg                                                                                                        <  1:46990/150‑1 (MQ=255)
                                                ggggcagattgccagcgactataacgggtgggtttatccccggtaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGt                                                                                                       >  1:299617‑M1/82‑150 (MQ=255)
                                                ggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttccgcctgcGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGt                                                                                                       >  2:68488‑M1/82‑150 (MQ=255)
                                                acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggat                                                                                                       <  1:711259‑M1/150‑49 (MQ=255)
                                                acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggat                                                                                                       <  1:875729‑M1/150‑49 (MQ=255)
                                                 caAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtt                                                                                                      >  2:383176‑M2/1‑148 (MQ=255)
                                                   gcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGTGCGGACCTTGCGCGGTCGGCCGTAGGTTCGGTTTTa                                                                                                    >  2:251264‑M1/79‑150 (MQ=255)
                                                    gaagaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttac                                                                                                   <  1:924934‑M2/150‑6 (MQ=255)
                                                          ccACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           >  1:1084753‑M1/1‑92 (MQ=255)
                                                          ccACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           <  2:1084753‑M1/136‑45 (MQ=255)
                                                           ccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGaa                                                                                            >  1:1078409‑M1/71‑150 (MQ=255)
                                                               aGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacccgcgaagagg                                                                                        >  2:1061829‑M2/1‑134 (MQ=255)
                                                                        cgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctacctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                               >  2:749854‑M1/58‑150 (MQ=255)
                                                                          gcgTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           <  1:301814‑M1/120‑45 (MQ=255)
                                                                          gcgTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagc                                                                                                           >  2:301814‑M1/1‑76 (MQ=255)
                                                                          gcgTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGc                                                                             <  2:924934/150‑1 (MQ=255)
                                                                               gtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTa                                                                                                    <  2:782187‑M1/72‑1 (MQ=255)
                                                                               gtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTa                                                                                                    >  1:782187‑M1/51‑122 (MQ=255)
                                                                                 gttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCa                                                                      >  2:154936/1‑150 (MQ=255)
                                                                                  ttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCAt                                                                     <  1:229543/150‑1 (MQ=255)
                                                                                  ttctCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCAt                                                                     >  2:757890/1‑150 (MQ=255)
                                                                                   tctcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtag                                                                                                               >  2:732388‑M1/1‑67 (MQ=255)
                                                                                   tctcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtag                                                                                                               <  1:732388‑M1/107‑41 (MQ=255)
                                                                                     tcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAAc                                                                  >  2:1054201/1‑150 (MQ=255)
                                                                                      cGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAg                                                                           <  1:790587/140‑1 (MQ=255)
                                                                                      cGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAg                                                                           >  2:790587/1‑140 (MQ=255)
                                                                                         tgtgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAtccgctcctacgggggaccgcgcacggtccgcgcctgtagga                                                                                                             <  2:737727‑M1/103‑43 (MQ=255)
                                                                                         tgtgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAtccgctcctacgggggaccgcgcacggtccgcgcctgtagga                                                                                                             >  1:737727‑M1/1‑61 (MQ=255)
                                                                                           tgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTGACCCGCGACGAGGCCGGCACACGCAGAAGCATAACCAAAGc                                                            >  1:102432/1‑150 (MQ=255)
                                                                                                    gttgttTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggat                                                                                                       >  1:135736‑M1/1‑50 (MQ=255)
                                                                                                    gttgttTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggat                                                                                                       <  2:135736‑M1/98‑49 (MQ=255)
                                                                                                    gttgttTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGt                                                   <  1:802273/150‑1 (MQ=255)
                                                                                                      tgttTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTc                                                 <  1:757890/150‑1 (MQ=255)
                                                                                                          tCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAtccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccg                                                                                                <  1:448336‑M1/99‑56 (MQ=255)
                                                                                                          tCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAtccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccg                                                                                                >  2:448336‑M1/1‑44 (MQ=255)
                                                                                                             cAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTAc                                                                                                                                            >  1:527409/1‑52 (MQ=255)
                                                                                                             cAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTAc                                                                                                                                            <  2:527409/52‑1 (MQ=255)
                                                                                                             cAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAAcc                                          >  1:488375/1‑150 (MQ=255)
                                                                                                              aaaGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacc                                                                                                  <  2:1117384‑M2/93‑7 (MQ=255)
                                                                                                              aaaGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacc                                                                                                  >  1:1117384‑M2/1‑87 (MQ=255)
                                                                                                              aaaGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAAccc                                         <  2:488375/150‑1 (MQ=255)
                                                                                                                 gCGTGATAGCGCCTGCGCCGGCCTCTTTGAGGGTAAAACCGCTCCTACAGGCGGAGCCCGAGCGCGGTCCACCGTAGGAGCGGATTCACCCGCGAAGAGGCCGGCACAGGCACAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGta                                      <  2:102432/150‑1 (MQ=38)
                                                                                                                     gATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAACGCATTTTTTGTTCTTTAACCCGTATaaa                                  <  1:154936/150‑1 (MQ=255)
                                                                                                                                   CGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCggg                                                                                                        >  2:39059‑M1/1‑66 (MQ=255)
                                                                                                                                   CGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCggg                                                                                                        <  1:39059‑M1/66‑1 (MQ=255)
                                                                                                                                     GCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCATGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                               <  1:695054‑M1/89‑1 (MQ=255)
                                                                                                                                     GCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCATGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                               >  2:695054‑M1/1‑89 (MQ=255)
                                                                                                                                      ccTCTTCGCGGGTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgct                 >  2:1061829‑M1/1‑16 (MQ=255)
                                                                                                                                       CTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGtt                                                  <  2:185866‑M1/116‑1 (MQ=255)
                                                                                                                                       CTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGtt                                                  >  1:185866‑M1/1‑116 (MQ=255)
                                                                                                                                          TTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTgg             <  2:693285‑M1/150‑1 (MQ=255)
                                                                                                                                          TTCGCGGGTAAATCCGCTCCTACAGGCGAGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTgg             >  2:550131‑M1/1‑150 (MQ=255)
                                                                                                                                              cgGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGAtttacccgcgaagaggccggcgcaggcgctatcacgctttggga                                                            >  2:448336‑M2/1‑55 (MQ=255)
                                                                                                                                              cgGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGAtttacccgcgaagaggccggcgcaggcgctatcacgctttggga                                                            <  1:448336‑M2/99‑45 (MQ=255)
                                                                                                                                                ggTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgcttt                                                                >  1:1117384‑M1/1‑6 (MQ=255)
                                                                                                                                                ggTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgcttt                                                                <  2:1117384‑M1/93‑88 (MQ=255)
                                                                                                                                                 gTAAAcccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttc      <  1:924934‑M1/150‑146 (MQ=255)
                                                                                                                                                    aacccgctcctacgggggaccgcgcacggtccgcgcctgtaggagcggatttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttg   >  2:383176‑M1/1‑2 (MQ=255)
                                                                                                                                                    AATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGccc   <  1:133107‑M1/150‑1 (MQ=255)
                                                                                                                                                    AATCCGCTCCTACAGGCGCGGACCGTCCGCGGTCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTGGCTGGCAATCTcccc   <  2:134241‑M1/150‑1 (MQ=255)
                                                                                                                                                     aTCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttgt  <  1:875729‑M2/150‑103 (MQ=255)
                                                                                                                                                     aTCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaac                                                      >  1:135736‑M2/1‑48 (MQ=255)
                                                                                                                                                     aTCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaac                                                      <  2:135736‑M2/98‑51 (MQ=255)
                                                                                                                                                     aTCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGtttacccgcgaagaggccggcacaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttgt  <  1:711259‑M2/150‑103 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCC  >  NC_002947/4896294‑4896592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.