New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2730281 | 34 (1.020) | 5 (0.150) | 5/264 | 3.6 | 12.8% | coding (685/1044 nt) | PP_2392 | MFS transporter |
? | NC_002947 | = 2730291 | 35 (1.080) | coding (695/1044 nt) | PP_2392 | MFS transporter | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ACATTCTCTACACCTATATCGTGCCGTTGCTGGCGGCGGCTGGCATGGCTGCGGACATTGGCCCGGTGCTGATGGTGTTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2730147‑2730281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGCTTGCGCAGGTGCCGG < NC_002947/2730291‑2730274 ACATTCTCTACACCTATATCGTGCCGTTGCTGATGGGTGCTTGCATGGCTGCGGACATTGGCCCGGTGCTGATGGTGTTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACCAGCTTGCGCAGGTGC < 2:467288/150‑1 GCCCGGTGCTGATGGTGTTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCAC > 1:555536/1‑74 GCCCGGTGCTGATGGTGTTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCAC < 2:555536/74‑1 TTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACCAGCTTGCGCAGGTGCCGG < 1:774090/76‑1 TTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACCAGCTTGCGCAGGTGCCGG > 2:774090/1‑76 TCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACCAGCTTGCGCAGGTGCCG < 1:516966/70‑1 TCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACCAGCTTGCGCAGGTGCCG > 2:516966/1‑70 ACATTCTCTACACCTATATCGTGCCGTTGCTGGCGGCGGCTGGCATGGCTGCGGACATTGGCCCGGTGCTGATGGTGTTTGGTCTGTCGGCGCTGGCCGGGATCGGCCTGGTAGGGCTGCTGGTCGACCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2730147‑2730281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGCTTGCGCAGGTGCCGG < NC_002947/2730291‑2730274 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |