| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4351452 = | 67 (0.920) | 5 (0.070) | 3/236 | NT | 7.5% | coding (342/654 nt) | PP_3823 | cytochrome c‑type protein |
| ? | NC_002947 | 4351479 = | 60 (0.860) | coding (315/654 nt) | PP_3823 | cytochrome c‑type protein | |||||
TACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4351603‑4351452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGCGCCAGTCCTGCAACTGCTTGGCAAGATAACCGGCCGGTAGCCCGGCCAAACGTGGAAAGCCGG > NC_002947/4351479‑4351627 gACCGGCCGGTTATCTTGCCAAGCACTTGCTGGTCCGCTATAACGCCAGCCTCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTG < 2:991187/149‑1TACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTG < 1:1447453/150‑1 CCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTG > 1:74354/1‑148 CCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTG < 2:74354/148‑1 GCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCGGGCACTGCCG‑GCAGGCTGGCCAGGTAGGTACTGAC < 2:884559/150‑1 CGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCT < 1:405635/99‑1 CGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCT > 2:405635/1‑99 TGGCCAGCCTGC‑CGGCAGTGCCCGCTGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGC > 1:1653790/1‑115 TGGCCAGCCTGC‑CGGCAGTGCCCGCTGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGC > 1:1654253/1‑115 TGGCCAGCCTGC‑CGGCAGTGCCCGCTGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGC < 2:1653790/115‑1 TGGCCAGCCTGC‑CGGCAGTGCCCGCTGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGC < 2:1654253/115‑1 GCTGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGCGCCAGTCCTGCAACTGCTTGGCAAGATAACCGGCCGGTAGCCCGGCCAAACGTGGAAA < 2:1902646/150‑1 TGGCCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGCGCCAGTCCTGCAACTGCTTGGCAAGATAACCGGCCGGTAGCCCGGCCAAACGTGGAAAGC > 1:645968/1‑150 CCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGCGCCAGTCCTGCAACTGCTTGGCAAGATAACCGGCCGGTAGCCCGGCCAAACGTGGAAAGCCGG > 2:1821969/1‑150 TACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAAGCAGCCAGTGATGGAACCTTTGGCCAAGGCCCTGAGCGACGACGAAATCAAGGCCGTCAGTACCTACCTGGCCAGCCTGC‑CGGCAGTGCCCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4351603‑4351452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGGTAGGTACTGACGGCCTTGATTTCGTCGTCGCTCAGGGCCTTGGCCAAAGGTTCCATCACTGGCTGCTTGCGGCTGCCGTTGCGCCAGTCCTGCAACTGCTTGGCAAGATAACCGGCCGGTAGCCCGGCCAAACGTGGAAAGCCGG > NC_002947/4351479‑4351627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |