New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5050841	34 (0.470)	3 (0.040)	3/238	NT	6.8%	coding (268/645 nt)	PP_5687	MFS transporter
	?	NC_002947	= 5050869	50 (0.710)					coding (240/645 nt)	PP_5687	MFS transporter

AAAGCGGGCGATATCGCGAGCCAGCCAAAATAGTTCCGACGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACGCTGCATGACAATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5050690‑5050841 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggTGGAATGCTTTTCTTGGGGGCATTGCATCCGGAAATAGTGATAA  <  NC_002947/5050869‑5050826                                                                                                                                                                                                      AAAGCGGGCGATATCGCGAGCCAGCCAAAATAGTTCCGACGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACGCTGCATGACAATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCC                                                <  2:1417373/150‑1 AAAGCGGGCGATATCGCGAGCCAGCCAAAATAGTTCCGACGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACCCTGCATGAGAATCAAAGTGACGCCGTTTGCAGCCCCCACCGCAACGGCAATCACTGAAATTATCACTATTTCC                                                >  2:216033/1‑150  AAGCGGGCGATATCGCGAGCCAGCCAAAATAGTTCCGACGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACGCTGCATGACAATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCG                                               >  2:1795857/1‑150                                        CGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACGATGCATGACAATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCGGTGGAATGCTTTTCTTGGGGGCATTGCATCCGGAAATA         <  2:175907/150‑1                                                                                       AATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCGGTGGAATGCTTTTCTTGGGGGCATTGCATCCGGAAATAGTGATAA  >  1:797594/1‑110                                                                                       AATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCGGTGGAATGCTTTTCTTGGGGGCATTGCATCCGGAAATAGTGATAA  <  2:797594/110‑1                                                                                                                                                                                                      AAAGCGGGCGATATCGCGAGCCAGCCAAAATAGTTCCGACGAGATTCATCGCTTAGATCAGCCCGCCCGACGTGACGCTGCATGACAATCAAAGTGACGCAGTTTGCAGCCCCCAACGCAACGGCAATCACTGAAATTATCACTATTTCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5050690‑5050841 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggTGGAATGCTTTTCTTGGGGGCATTGCATCCGGAAATAGTGATAA  <  NC_002947/5050869‑5050826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.