New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 562730	45 (0.620)	5 (0.070)	5/232	NT	9.9%	coding (453/621 nt)	rpsD	30S ribosomal protein S4
	?	NC_002947	= 562763	49 (0.720)					coding (486/621 nt)	rpsD	30S ribosomal protein S4

TGGGCTTCGGCTCGACTCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGT  >  NC_002947/562591‑562879                                                                                                                                                   |                                                                                                                                                      ggggCGTCGGCTCGACTCGTTCAGAGTCCAGTCAGCTGGTTTCGCAAAAATCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCa                                                                                                                                             <  2:1773590/149‑1 (MQ=255)  gggCTTCGGCTCGACTCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCAt                                                                                                                                            >  1:1632960/1‑150 (MQ=255)  gggCTTCGGCTCGACTCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCAt                                                                                                                                            >  1:183509/1‑150 (MQ=255)               aCTCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCtt                                                                                                                               <  2:1632960/150‑1 (MQ=255)                 tCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGa                                                                                                                             >  1:211043/1‑150 (MQ=255)                    ttCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACt                                                                                                                          >  1:1220860/1‑150 (MQ=255)                      ccGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACtgt                                                                                                                        <  2:137145/150‑1 (MQ=255)                       cGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCgcacagttcaagggcttgaacaatgcgcaact                                                                                                                       >  2:1607147‑M1/1‑118 (MQ=255)                         aGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCg                                                                                                                     >  2:723834‑M2/1‑149 (MQ=255)                               gTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagc                                                                                                               >  2:183509‑M2/1‑143 (MQ=255)                                 cAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCgcacagttcaagggcttgaacaatgcgcaactggcccagcga                                                                                                             <  1:1607147‑M1/150‑43 (MQ=255)                                  aGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTg                                                                                                            >  2:1926582/1‑150 (MQ=255)                                    cTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCGATCCTACCAAGTTCGTCCGGGTGACGTGGTGGTAGATCCCGAGAAATCTCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGc                                                                                                          >  1:442353/1‑150 (MQ=255)                                    cTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGc                                                                                                          >  1:1567261/1‑150 (MQ=255)                                     tGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCgcacagttcaagggcttgaacaatgcgcaactggcccagcgatttc                                                                                                         <  2:562517‑M1/150‑47 (MQ=255)                                            gCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGa                                                                                                  >  2:659027/1‑150 (MQ=255)                                             cacaAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAg                                                                                                 <  1:1337952/150‑1 (MQ=255)                                                aaaGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTgg                                                                                              <  2:819510/150‑1 (MQ=255)                                                 aaGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTggg                                                                                             <  2:1881522/150‑1 (MQ=255)                                                  aGCGATCAGCGTCGAAGGTGCGACTGTTCAGGCTCGACCTGACCATGTGCTGCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGt                                                                                            <  2:211043/150‑1 (MQ=255)                                                  aGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTTGGCTCCCAGCGTGGCCGCGTTGAGTGGGt                                                                                            <  1:544150/150‑1 (MQ=255)                                                     gATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGCACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGa                                                                                         <  2:692044/150‑1 (MQ=255)                                                        cAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGCTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                      <  1:816867/150‑1 (MQ=255)                                                         aGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTg                                                                                     <  2:1127696/150‑1 (MQ=255)                                                            ggcAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCGGGGTGACGTGGTCGCAGTACGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCGGTTGCGCATTGTTCAAGCCCTTGAACTGTTCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAt                                                                                  >  2:132836/3‑150 (MQ=255)                                                             tCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCtt                                                                                                                               >  2:1902631/1‑104 (MQ=255)                                                             tCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCtt                                                                                                                               <  1:1902631/104‑1 (MQ=255)                                                                  ggTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATgctgct                                                                            >  2:263202/1‑150 (MQ=255)                                                                                  ttCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGttt                                                            >  1:1660205/1‑150 (MQ=255)                                                                                     cATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCgcacagttcaagggcttgaacaatgcgcaactggcccagcgatttctcg                                                                                                      <  2:814572‑M1/112‑50 (MQ=255)                                                                                     cATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGGGCCAGTTGCgcacagttcaagggcttgaacaatgcgcaactggcccagcgatttctcg                                                                                                      >  1:814572‑M1/1‑63 (MQ=255)                                                                                      aTCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                               >  1:664929/1‑127 (MQ=255)                                                                                      aTCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                               <  2:664929/127‑1 (MQ=255)                                                                                          tACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCg                                                                   <  2:1643682/135‑1 (MQ=255)                                                                                          tACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCg                                                                   >  1:1643682/1‑135 (MQ=255)                                                                                             cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                      >  2:1002682/1‑113 (MQ=255)                                                                                             cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGt                                                                                      <  1:1002682/113‑1 (MQ=255)                                                                                             cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGtt                                                 >  2:962623/1‑150 (MQ=255)                                                                                             cAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGtt                                                 >  2:925679/1‑150 (MQ=255)                                                                                                    gTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                               >  2:131570/1‑113 (MQ=255)                                                                                                    gTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgct                                                                               <  1:131570/113‑1 (MQ=255)                                                                                                     tCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                             <  1:107002/114‑1 (MQ=255)                                                                                                     tCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                             >  2:107002/1‑114 (MQ=255)                                                                                                        gggTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAg                                      <  2:442353/150‑1 (MQ=255)                                                                                                         ggTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACtgt                                                                                                                        <  2:487605/67‑1 (MQ=255)                                                                                                         ggTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACtgt                                                                                                                        >  1:487605/1‑67 (MQ=255)                                                                                                            cccGTGGTTGCGGTCCTCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCGTTTCAACTGTTCGCCCAGCGGGGGCGCGTTGAATGGGTTGACGTGCATGCTGATAAAAAGTCGGGCGTGTTCAAGAACGTTCCTGCTCGCAGCGAc                                  <  2:200923/148‑1 (MQ=255)                                                                                                               gTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                             <  1:890861/104‑1 (MQ=255)                                                                                                               gTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGAtgctgc                                                                             >  2:890861/1‑104 (MQ=255)                                                                                                                tGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGt                              <  2:1220860/150‑1 (MQ=255)                                                                                                                    cGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGc                          <  1:263202/150‑1 (MQ=255)                                                                                                                            gcgAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCa                  <  1:1926582/150‑1 (MQ=255)                                                                                                                             cgAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatg                                                       >  1:814572‑M2/1‑49 (MQ=255)                                                                                                                             cgAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatg                                                       <  2:814572‑M2/112‑64 (MQ=255)                                                                                                                                gaAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaacca              <  2:562517‑M2/150‑105 (MQ=255)                                                                                                                                    tCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCgcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaaccagctg          <  1:1607147‑M2/150‑109 (MQ=255)                                                                                                                                      gCTGG‑‑‑‑‑‑‑GCgcacagttcaagggcttgaacaatgcgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaaccagctgac        >  2:183509‑M1/1‑7 (MQ=255)                                                                                                                                                  gCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTg   >  1:85993/1‑150 (MQ=255)                                                                                                                                                   cgcacagttcaagggcttgaacaatgcgcaactggcccagcgatttctcgcggactgcgaccacgtcacccggacgaacttggtaggatggaatgtttacagtcttaccgttgacgctgatcgctttgtgcgaaaccagctgacgggact  >  2:723834‑M1/1‑1 (MQ=255)                                                                                                                                                   ccAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGt  >  2:956725/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TGGGCTTCGGCTCGACTCGTTCCGAGTCCCGTCAGCTGGTTTCGCACAAAGCGATCAGCGTCAACGGTAAGACTGTAAACATTCCATCCTACCAAGTTCGTCCGGGTGACGTGGTCGCAGTCCGCGAGAAATCGCTGG‑‑‑‑‑‑‑GCCAGTTGCGCATTGTTCAAGCCCTTGAACTGTGCGCCCAGCGTGGCCGCGTTGAGTGGGTTGACGTGGATGCTGCTAAAAAGTCGGGCGTTTTCAAGAACGTTCCTGCTCGCAGCGACCTGTCTGCCGACATCAACGAAAACCTGATTGT  >  NC_002947/562591‑562879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.