New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1783477 =83 (1.140)5 (0.070) 4/234 NT 6.3% coding (642/2703 nt) glnD uridylyltransferase
?NC_002947 1783499 = 71 (1.030)coding (620/2703 nt) glnD uridylyltransferase

TTTCCAGAGGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCG  >  NC_002947/1783330‑1783620
                                                                                                                                                   |                                                                                                                                                 
tttCCAGAGGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGa                                                                                                                                                 >  1:45684/1‑150 (MQ=255)
tttCCAGAGGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCAACCACAGGAACTTCTGGTGGAGATCCAGGCCACCTTGcta                                                                                                                                                 >  2:1870780/1‑148 (MQ=255)
 ttCCAGAGGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGaa                                                                                                                                                <  2:42855/150‑1 (MQ=255)
 accatcgccggccccgaggccttgcgccagcgcatgctggaagtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGaa                                                                                                                                                >  2:638954‑M1/147‑150 (MQ=255)
   catcgccggccccgaggccttgcgccagcgcatgctggaagtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAAcc                                                                                                                                              <  2:1499307‑M1/6‑1 (MQ=255)
   catcgccggccccgaggccttgcgccagcgcatgctggaagtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAAcc                                                                                                                                              >  1:902708‑M1/145‑150 (MQ=255)
   catcgccggccccgaggccttgcgccagcgcatgctggaagtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAAcc                                                                                                                                              <  1:28285‑M1/6‑1 (MQ=255)
     agagGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCt                                                                                                                                            >  2:999498/1‑150 (MQ=255)
      gagGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCtt                                                                                                                                           >  2:1601169/1‑150 (MQ=255)
      gagGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCtt                                                                                                                                           >  1:313870/1‑150 (MQ=255)
       agGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTg                                                                                                                                          >  2:34/1‑150 (MQ=255)
            gTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGtt                                                                                                                                     <  1:914418/150‑1 (MQ=255)
             tacTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑g                                                                                                                                  <  2:1065695/148‑1 (MQ=255)
               cTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑ggg                                                                                                                                >  2:1750575/1‑150 (MQ=255)
                      gAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAgg                                                                                                                         <  2:785924/150‑1 (MQ=255)
                        aGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGtt                                                                                                                       <  1:558644/150‑1 (MQ=255)
                        aGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCACGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGtt                                                                                                                       <  2:1939116/150‑1 (MQ=255)
                          ccAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGt                                                                                                                     >  2:538549/1‑150 (MQ=255)
                                gTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCgg                                                                                                               >  2:1387805/1‑150 (MQ=255)
                                 ttCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGgt                                                                                                              >  1:1563387/1‑150 (MQ=255)
                                     ttCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCg                                                                                                          <  2:1811185/150‑1 (MQ=255)
                                       ctcGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGGCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGtt                                                                                                        <  2:948653/150‑1 (MQ=255)
                                        tcGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTg                                                                                                       >  1:195397/1‑150 (MQ=255)
                                           gtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                           >  1:1754314‑M1/105‑127 (MQ=255)
                                           gtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                           <  2:1754314‑M1/23‑1 (MQ=255)
                                                 aGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTgtgg                                                                                              >  1:1712962/1‑150 (MQ=255)
                                                 aGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTgtgg                                                                                              >  2:1696953/1‑150 (MQ=255)
                                                         gCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGc                                                                                      <  1:1387805/150‑1 (MQ=255)
                                                            ttCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                   >  1:636095/1‑150 (MQ=255)
                                                              cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                 <  1:1750575/150‑1 (MQ=255)
                                                              cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                 <  1:1601169/150‑1 (MQ=255)
                                                              cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                 <  2:313870/150‑1 (MQ=255)
                                                                   gCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                            <  1:34/150‑1 (MQ=255)
                                                                    ccAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCgg                                                                           >  2:1660123/1‑150 (MQ=255)
                                                                       gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                            >  2:63028/1‑146 (MQ=255)
                                                                       gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                            <  1:63028/146‑1 (MQ=255)
                                                                       gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgc                                                                        <  1:383097/150‑1 (MQ=255)
                                                                       gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgc                                                                        >  1:947831/1‑150 (MQ=255)
                                                                           gatctggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCATGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCtt                                                                    <  2:1232187/145‑1 (MQ=255)
                                                                            tgcaGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTg                                                                   <  1:999498/150‑1 (MQ=255)
                                                                               aGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACGTGTGGTGGCGGGCCTTGa                                                                                 <  2:1118589/133‑1 (MQ=255)
                                                                               aGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACGTGTGGTGGCGGGCCTTGa                                                                                 >  1:1118589/1‑133 (MQ=255)
                                                                                ggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                               <  2:1777119/150‑1 (MQ=255)
                                                                                ggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                               <  2:1777107/150‑1 (MQ=255)
                                                                                 gTTGAGCGTCCCGTACTGGCGGCGTACCGCCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTgagatc                                                              >  1:1232187/1‑145 (MQ=255)
                                                                                    gAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGgaa                                                           <  2:1890046/150‑1 (MQ=255)
                                                                                    gAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGgaa                                                           >  2:526215/1‑150 (MQ=255)
                                                                                         tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAg                                                                                                                          <  1:414446/82‑1 (MQ=255)
                                                                                         tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAg                                                                                                                          >  2:414446/1‑82 (MQ=255)
                                                                                         tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACt                                                      >  1:1645950/1‑150 (MQ=255)
                                                                                           ccGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                 >  1:1552633/1‑121 (MQ=255)
                                                                                           ccGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                 <  2:1552633/121‑1 (MQ=255)
                                                                                             gcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                           >  1:328465‑M1/55‑77 (MQ=255)
                                                                                             gcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                           <  2:328465‑M1/23‑1 (MQ=255)
                                                                                               aCTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCgg                                                                                        <  1:1279085/110‑1 (MQ=255)
                                                                                               aCTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCgg                                                                                        >  2:1279085/1‑110 (MQ=255)
                                                                                                 tGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTc                                              <  1:1660123/150‑1 (MQ=255)
                                                                                                  ggcggcGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                             <  1:1696953/150‑1 (MQ=255)
                                                                                                   gcggcgGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCgg                                            >  2:684086/1‑150 (MQ=255)
                                                                                                   gcggcgGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCgg                                            <  2:1645950/150‑1 (MQ=255)
                                                                                                     ggcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgt                                                                                                <  1:1130131/96‑1 (MQ=255)
                                                                                                     ggcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgt                                                                                                >  2:1130131/1‑96 (MQ=255)
                                                                                                      gcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCca                                         >  2:1346803/1‑150 (MQ=255)
                                                                                                           ccacccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑g                                                                                                                                  >  2:990734/1‑56 (MQ=255)
                                                                                                           ccacccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑g                                                                                                                                  <  1:990734/56‑1 (MQ=255)
                                                                                                              cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgc                                                                          >  2:1069215/1‑109 (MQ=255)
                                                                                                              cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgc                                                                          <  1:1069215/109‑1 (MQ=255)
                                                                                                              cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTgcg                                 >  2:1103325/1‑150 (MQ=255)
                                                                                                               ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                               >  2:135667/1‑119 (MQ=255)
                                                                                                               ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                               <  1:135667/119‑1 (MQ=255)
                                                                                                               ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                             <  2:1721130/137‑1 (MQ=255)
                                                                                                               ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                             >  1:1721130/1‑137 (MQ=255)
                                                                                                                 acaGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCgg                              >  1:304447/1‑150 (MQ=255)
                                                                                                                  caGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGt                             <  1:1381287/150‑1 (MQ=255)
                                                                                                                        cGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTg                                                 <  1:441495/124‑1 (MQ=255)
                                                                                                                        cGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTg                                                 >  2:441495/1‑124 (MQ=255)
                                                                                                                         gTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTg                      <  1:684086/150‑1 (MQ=255)
                                                                                                                          tCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgtg                                                                                               >  2:1793602/1‑76 (MQ=255)
                                                                                                                          tCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgtg                                                                                               <  1:1793602/76‑1 (MQ=255)
                                                                                                                          tCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGa                     >  2:968005/1‑150 (MQ=255)
                                                                                                                             ggATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACtt                  <  1:526215/150‑1 (MQ=255)
                                                                                                                                tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGcc                                                                <  2:776324/101‑1 (MQ=255)
                                                                                                                                tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGcc                                                                >  1:776324/1‑101 (MQ=255)
                                                                                                                                tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCa               <  2:1563387/150‑1 (MQ=255)
                                                                                                                                tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCa               <  1:538549/150‑1 (MQ=255)
                                                                                                                                 cgacaccgagtacaacctCGAACCCA‑‑ACGTCAAGGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAg              <  1:771877‑M1/132‑1 (MQ=255)
                                                                                                                                    aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTgg                        <  2:1688550/137‑1 (MQ=255)
                                                                                                                                    aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTgg                        >  1:1688550/1‑137 (MQ=255)
                                                                                                                                    aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCAt           >  1:1499307/1‑150 (MQ=255)
                                                                                                                                    aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCAt           <  1:1346803/150‑1 (MQ=255)
                                                                                                                                      gCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATgc         >  2:726367/1‑150 (MQ=255)
                                                                                                                                         ggCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCt      <  1:1103325/150‑1 (MQ=255)
                                                                                                                                             aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                   <  1:1151654/69‑1 (MQ=255)
                                                                                                                                             aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                   >  2:1151654/1‑69 (MQ=255)
                                                                                                                                             aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGgcg  >  2:1597156/1‑150 (MQ=255)
                                                                                                                                               cTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                   >  2:1562929/1‑67 (MQ=255)
                                                                                                                                               cTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                   <  1:1562929/67‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTTCCAGAGGAAGTCCTGGGACGAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCG  >  NC_002947/1783330‑1783620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.