New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3676073	55 (0.750)	5 (0.080)	5/220	NT	8.6%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	57 (0.880)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein

CGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCG  >  NC_002947/3675949‑3676242                                                                                                                                                    |                                                                                                                                                    cGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                                                   >  2:604830‑M2/1‑148 (MQ=255)    ccccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttg                                                                                                                                                >  2:1856114‑M2/1‑145 (MQ=255)             cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacg                                                                                                                                       <  2:186652‑M2/150‑15 (MQ=255)                ggATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTc                                                                                                                                    <  1:1252389/150‑1 (MQ=255)                  aTGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGGGTAGCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                                                  <  1:821410/150‑1 (MQ=255)                      cGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACcaca                                                                                                                              >  2:1481831/1‑150 (MQ=255)                       gAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAg                                                                                                                             >  2:332557/1‑150 (MQ=255)                        aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                                            <  1:567405/150‑1 (MQ=255)                             ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACt                                                                                                                       >  2:1578103/1‑150 (MQ=255)                              cTCAAGTCGACCCACAGGGGCCGGCCAAGCCTGCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTTCGATCTTTTGTGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTg                                                                                                                      >  2:1390214/1‑150 (MQ=255)                              cTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTg                                                                                                                      <  1:1466520/150‑1 (MQ=255)                               tCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGt                                                                                                                     <  1:1595751/150‑1 (MQ=255)                                   gTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCATCACAGACGACTGTCAGc                                                                                                                 <  1:1181249/150‑1 (MQ=255)                                         ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTc                                                                                                                    <  2:1746587/141‑1 (MQ=255)                                         ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTc                                                                                                                    >  1:1746587/1‑141 (MQ=255)                                            caGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgc                                                                                                        <  1:1578103/150‑1 (MQ=255)                                            caGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgc                                                                                                        <  1:327922/150‑1 (MQ=255)                                              ggggCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgcgc                                                                                                      <  2:255300/150‑1 (MQ=255)                                               gggCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGcc                                                                                                     >  2:328402/1‑150 (MQ=255)                                                ggccggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagac                                                                                                                                   >  2:393359‑M2/1‑101 (MQ=255)                                                ggccggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagac                                                                                                                                   <  1:393359‑M2/119‑19 (MQ=255)                                                    ggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg‑gcg                                                                                               <  2:384639/150‑1 (MQ=255)                                                    ggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg‑gcg                                                                                               >  2:106546/1‑150 (MQ=255)                                                                   agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgcc                                                                                >  1:1653738/1‑150 (MQ=255)                                                                   agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgc                                                                                 >  2:1258125/1‑149 (MQ=255)                                                                   agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGAGCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgc                                                                                 <  1:1258125/149‑1 (MQ=255)                                                                       aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg                                                                                                   <  2:136115/128‑1 (MQ=255)                                                                       aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg                                                                                                   >  1:136115/1‑128 (MQ=255)                                                                              aaaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCctct                                                                                         >  2:1076294/1‑130 (MQ=255)                                                                              aaaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCctct                                                                                         <  1:1076294/130‑1 (MQ=255)                                                                               aaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCTGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTg                                                                    >  1:1853698/1‑150 (MQ=255)                                                                               aaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTg                                                                    >  1:76149/1‑150 (MQ=255)                                                                                  ggAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                                                 <  1:1481831/150‑1 (MQ=255)                                                                                   gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgac                                                                                                                                        >  1:1356954‑M2/1‑66 (MQ=255)                                                                                   gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgac                                                                                                                                        <  2:1356954‑M2/79‑14 (MQ=255)                                                                                    aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                                               >  2:386781/1‑150 (MQ=255)                                                                                    aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                                               <  1:332557/150‑1 (MQ=255)                                                                                     gTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCggg                                                              <  2:76149/150‑1 (MQ=255)                                                                                        aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                                                  <  2:70295/80‑1 (MQ=255)                                                                                        aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                                                  >  1:70295/1‑80 (MQ=255)                                                                                         aCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGCAGGCGACCACAGACGACAGTAAAACATCA‑CACGTCTGAACTGCCGTTACTCCCGCCGCCGACAGCTTGATCGGGTAGt                                                          >  1:917828/1‑150 (MQ=255)                                                                                          ccACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACAAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTg                                                         >  2:752801/1‑150 (MQ=255)                                                                                           cACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGc                                                        >  2:1913683/1‑150 (MQ=255)                                                                                               gCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGc                                                    <  1:106546/150‑1 (MQ=255)                                                                                                 cTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCAGACAGCTTGATCGGGTAGTGCACGCTg                                                  >  2:168941/1‑150 (MQ=255)                                                                                                    gATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGACCGGGTAGTGCACGCTGATc                                               >  2:1280553/1‑150 (MQ=255)                                                                                                        aCCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                                           <  1:707225/150‑1 (MQ=255)                                                                                                         ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTg                                          >  1:1705793/1‑150 (MQ=255)                                                                                                          cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCa                                                                                                                   <  2:761071/77‑1 (MQ=255)                                                                                                          cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCa                                                                                                                   >  1:761071/1‑77 (MQ=255)                                                                                                                cgtcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg                                   <  1:328402/150‑1 (MQ=255)                                                                                                                  tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtt                                                                                                               <  1:806694‑M2/73‑39 (MQ=255)                                                                                                                  tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtt                                                                                                               >  2:806694‑M2/1‑35 (MQ=255)                                                                                                                  tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTg                                             <  2:1276546/138‑1 (MQ=255)                                                                                                                  tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTg                                             >  1:1276546/1‑138 (MQ=255)                                                                                                                   cgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggag                                 <  1:127349‑M2/150‑117 (MQ=255)                                                                                                                     ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc                              <  1:1586490/150‑1 (MQ=255)                                                                                                                       ggCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgt                                                                  >  1:1032194‑M2/1‑30 (MQ=255)                                                                                                                       ggCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgt                                                                  <  2:1032194‑M2/113‑84 (MQ=255)                                                                                                                                tgtgCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCAACAGCTTGGTCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTAc                   >  2:1509021/1‑150 (MQ=255)                                                                                                                                   gCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTgat                                           <  2:159089/123‑3 (MQ=255)                                                                                                                                   gCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTgat                                           >  1:159089/1‑121 (MQ=255)                                                                                                                                   gCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGt                >  2:1692413/1‑150 (MQ=255)                                                                                                                                     gATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGc                                                                       >  2:199402/1‑93 (MQ=255)                                                                                                                                     gATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGc                                                                       <  1:199402/93‑1 (MQ=255)                                                                                                                                     gATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCa              >  1:1534271/1‑150 (MQ=255)                                                                                                                                     gATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTCATTATTGCTTACCGCCACGCTACCGTCa              <  1:1509021/150‑1 (MQ=255)                                                                                                                                          cTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAAt         <  2:1653738/150‑1 (MQ=255)                                                                                                                                           ttGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGa                                         <  1:1031206/117‑1 (MQ=255)                                                                                                                                           ttGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGa                                         >  2:1031206/1‑117 (MQ=255)                                                                                                                                           ttGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATc        >  2:1027655/1‑150 (MQ=255)                                                                                                                                               gAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCAACGCTACCGTGATGAATCAAAc    >  1:91988/1‑150 (MQ=255)                                                                                                                                               gAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCCCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAAc    <  1:1390214/150‑1 (MQ=255)                                                                                                                                                 aCCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAAcct  >  1:681085/1‑149 (MQ=255)                                                                                                                                                  ccAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTg                                                         <  2:868523/94‑1 (MQ=255)                                                                                                                                                  ccAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTg                                                         >  1:868523/1‑94 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAATCAAACCG  >  NC_002947/3675949‑3676242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.