New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 601389177 (0.970)19 (0.300) 15/212 4.3 23.4% intergenic (+40/+70) xpt/PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
?NC_002947 = 6013919 63 (0.990)intergenic (+68/+42) xpt/PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Rejected: Coverage evenness skew score above cutoff.

GCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013724‑6013891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTG  <  NC_002947/6013919‑6013776
                                                                                                                                                                                                                                                                                                                        
GCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGC                                                                                                                                                                    >  1:1256277/1‑150
  CTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGAAGCTGGAAGGTGGTGTGGTCCGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCAC                                                                                                                                                                  >  1:1516181/1‑150
    GGGTATCGTGATCGAGAAGTCGTTCCAGTGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGC                                                                                                                                                                <  2:202293/150‑1
      GTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCC                                                                                                                                                              >  1:517017/1‑150
         TCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCT                                                                                                                                                           <  1:828974/150‑1
                CGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                    <  2:1645671/150‑1
                 GAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                   >  2:660772/1‑150
                 GAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                   >  1:314928/1‑150
                  AGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                  <  2:261387/150‑1
                  AGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAACTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                  <  1:636239/150‑1
                      GTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTTCTTCGCGGGCACGCCCGCTCCCACAGGTACGG                                                                                                                                              >  2:1578433/1‑150
                                GGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTTCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTC                                                                                                                                    <  1:1578433/150‑1
                                GGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCGGCACAGCGTTC                                                                                                                                    <  2:517017/150‑1
                                           CGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGC                                                                                                                         >  2:834985/1‑150
                                               CTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCA                                                                                                                     <  2:876053/150‑1
                                                    CAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGATTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                <  2:1974810/150‑1
                                                     AGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTG                                                                                                               <  1:834985/150‑1
                                                     AGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTG                                                                                                               <  1:891838/150‑1
                                                              TACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGC                                                                                                      <  1:832644/150‑1
                                                                        AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                >  2:314870/1‑130
                                                                        AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                <  1:314870/130‑1
                                                                                GCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCAC                                                                                                                    <  2:1384805/118‑1
                                                                                GCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCAC                                                                                                                    >  1:1384805/1‑118
                                                                                            TCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                    <  1:759193/74‑1
                                                                                            TCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                    >  2:759193/1‑74
                                                                                                            TGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGT                                                                                                                           >  2:228818/1‑83
                                                                                                            TGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGT                                                                                                                           <  1:228818/83‑1
                                                                                                               TCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCAC                                                                                                                    >  2:569771/1‑87
                                                                                                               TCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCAC                                                                                                                    <  1:569771/87‑1
                                                                                                                        TCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGC                                                                                                                      >  1:1721317/1‑76
                                                                                                                        TCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGC                                                                                                                      <  2:1721317/76‑1
                                                                                                                                                  GGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCC                                               <  2:1508269/121‑1
                                                                                                                                                  GGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCC                                               >  1:1508269/1‑121
                                                                                                                                                    GCACGCCCGCTCCCACCGGTACGGCACAGCGTTCGAGACCTGTGCTGCACATGTAGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTCACCACACCACCTTCCAGCGACTTCACCCGAGCCAGCGATTGAACGC                >  2:314928/1‑150
                                                                                                                                                     CACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG               <  2:583835/150‑1
                                                                                                                                                      ACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGG              >  1:1491491/1‑150
                                                                                                                                                      ACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGT                                                                              >  1:398475/1‑86
                                                                                                                                                      ACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGT                                                                              <  2:398475/86‑1
                                                                                                                                                           CGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGA                                                                      >  2:148846/1‑89
                                                                                                                                                           CGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGA                                                                      <  1:148846/89‑1
                                                                                                                                                              tcaCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGTGCCAGCGATTCAACGCGGTAACCCTG      >  2:1569707/4‑150
                                                                                                                                                              TCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTG      >  1:70565/1‑150
                                                                                                                                                                  ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTG  >  1:278840/1‑150
                                                                                                                                                                  ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTCCCAGCGACTTCACCCGGGCCAGC                          <  1:1263979/126‑1
                                                                                                                                                                  ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTCCCAGCGACTTCACCCGGGCCAGC                          >  2:1263979/1‑126
                                                                                                                                                                  ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGA                                                                      <  1:1700875/82‑1
                                                                                                                                                                  ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGA                                                                      >  2:1700875/1‑82
                                                                                                                                                                       TACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG               <  1:1482196/132‑1
                                                                                                                                                                       TACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG               >  2:1482196/1‑132
                                                                                                                                                                                                                                                                                                                        
GCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013724‑6013891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTG  <  NC_002947/6013919‑6013776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.