Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947195,6340CT44.9% 66.2 / 213.7 168T380T (ACC→ACT) PP_0168putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base C (49/43);  new base T (35/40);  total (85/83)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 186 total aligned reads displayed.

TCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCAG  >  NC_002947/195486‑195783
                                                                                                                                                    |                                                                                                                                                       
tCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGAcaccacca                                                                                                                                                        >  1:3640/1‑150 (MQ=255)
  gATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACaccaccacc                                                                                                                                                      <  1:654004/150‑1 (MQ=255)
   aTTTCCAGACCCCGGCCGATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCTACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACcg                                                                                                                                                     >  2:1494430/1‑150 (MQ=255)
    tttCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCCCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGCCCAACGACTCGGCCGACACCACCACcgc                                                                                                                                                    >  2:245093/1‑150 (MQ=255)
    tttCCAGACCCCGGCAAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACcgc                                                                                                                                                    <  1:1683998/150‑1 (MQ=255)
       ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAc                                                                                                                                                 <  1:666138/150‑1 (MQ=40)
       ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAc                                                                                                                                                 >  1:295494/1‑150 (MQ=255)
             cccGGCCGATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCTACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGAc                                                                                                                                           <  1:1494430/150‑1 (MQ=255)
             cccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGAc                                                                                                                                           >  1:965161/1‑150 (MQ=255)
              ccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACg                                                                                                                                          >  2:658852/1‑150 (MQ=40)
                  cgaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                                                                                                      <  1:1039373/148‑1 (MQ=2)
                   gaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAg                                                                                                                                     <  1:1311185/149‑1 (MQ=12)
                     aTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATAGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCGGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGcc                                                                                                                                   >  1:1902184/1‑150 (MQ=255)
                      tGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGCCTCGGTCGACACCACCACCGCGACCCTGACGGCGAGccc                                                                                                                                  <  2:1788336/150‑1 (MQ=38)
                           tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCgg                                                                                                                             >  2:302351/1‑150 (MQ=17)
                              acaacaACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑Ca                                                                                                                        >  2:1541990/1‑150 (MQ=12)
                                aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CAcc                                                                                                                      >  2:1292239/1‑150 (MQ=38)
                                  caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACcgc                                                                                                                                                    >  2:1312664/1‑120 (MQ=255)
                                   aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGaa                                                                                                                   <  1:818201/150‑1 (MQ=38)
                                   aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGaa                                                                                                                   <  1:1712990/150‑1 (MQ=39)
                                    acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAg                                                                                                                  <  1:428691/150‑1 (MQ=17)
                                       gTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAggcg                                                                                                               <  1:1292239/150‑1 (MQ=37)
                                               gTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGTGTGATc                                                                                                       >  2:1091260/1‑150 (MQ=255)
                                                tCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCACCGACTCGGACCACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCa                                                                                                      >  1:735908/1‑150 (MQ=255)
                                                  aGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACt                                                                                                    >  2:1618981/1‑150 (MQ=12)
                                                   gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CAcc                                                                                                                      >  2:1778920/1‑131 (MQ=16)
                                                    cGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTa                                                                                                  <  1:591645/150‑1 (MQ=12)
                                                           aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTg                                                                                           >  2:1698340/1‑150 (MQ=12)
                                                           aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGATC‑TCGG‑TGGACGGAAGGCGGCGTGATCACTTACACCGTg                                                                                           >  2:159961/1‑150 (MQ=11)
                                                            tCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGa                                                                                          <  2:1921941/150‑1 (MQ=40)
                                                            tCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CAc                                                                                                                       >  1:1487568/1‑121 (MQ=16)
                                                                gaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CGCCGAAGGCGGCGTGATCACTTACACCGTGACCCt                                                                                      <  1:383085/150‑1 (MQ=12)
                                                                  aCGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa                                                                                    <  1:1163675/150‑1 (MQ=40)
                                                                  aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa                                                                                    <  1:1698340/150‑1 (MQ=17)
                                                                   cGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTa                                                                                                  >  2:777950/1‑135 (MQ=255)
                                                                      cacaGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCaa                                                                                >  1:1045584/1‑150 (MQ=17)
                                                                      cACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg                                                                                                                              <  2:1232987/106‑1 (MQ=40)
                                                                       acaggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACcgc                                                                                                                                                    <  1:1358211/80‑1 (MQ=255)
                                                                       acaggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc                                                                               <  2:1045584/147‑1 (MQ=18)
                                                                           gcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAACGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTg                                                                           <  1:158269/150‑1 (MQ=12)
                                                                             ggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGcc                                                                         >  2:977455/1‑150 (MQ=2)
                                                                             ggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGcc                                                                         >  2:9367/1‑150 (MQ=40)
                                                                                  tttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGAc                                                                    >  1:1122311/1‑150 (MQ=25)
                                                                                  tttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGAc                                                                    >  1:25414/1‑150 (MQ=25)
                                                                                  tttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGAc                                                                    >  1:89394/1‑150 (MQ=25)
                                                                                   ttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc                                                                              >  2:1975855/1‑139 (MQ=12)
                                                                                   ttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGCCGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACg                                                                   >  1:1928282/1‑150 (MQ=255)
                                                                                     cGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGt                                                                                            >  2:575493/1‑123 (MQ=18)
                                                                                      gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCg                                                                <  2:711730/150‑1 (MQ=12)
                                                                                      gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCCAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCg                                                                >  1:1229294/1‑150 (MQ=255)
                                                                                      gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCCGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCg                                                                <  1:467232/150‑1 (MQ=255)
                                                                                      gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTATACACAACGACTCGGAACCTGACGGAGAGCCCGTCGG‑T‑CACCGAATCCCGCTTGACCACTTACCCCTAGAACCTGAGCAACACTGCCAAGACGCCg                                                                >  2:175794/1‑150 (MQ=2)
                                                                                          aaCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGtga                                                            <  1:1548378/150‑3 (MQ=12)
                                                                                           aCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAAc                                                           >  1:1591890/1‑150 (MQ=38)
                                                                                            cTGACCCCGAATCCGCCCCCGGCTCAGACCACGATCAACTACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAAcc                                                          <  2:458977/150‑1 (MQ=255)
                                                                                             tGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCg                                                         >  2:173374/1‑150 (MQ=255)
                                                                                             tGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCg                                                         >  2:381273/1‑150 (MQ=255)
                                                                                                ccccGACTCCGACCCCGGCTCAGACCACGAACAACGACTCGGTCGATGCCACCACCGCGCCCCCGACGGCGAGCCCGCCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGa                                                      <  2:102112/150‑1 (MQ=11)
                                                                                                 cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGac                                                     >  2:1896311/1‑149 (MQ=255)
                                                                                                 cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGc                                                                  <  1:570038/137‑1 (MQ=21)
                                                                                                 cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGaa                                                     >  1:1405886/1‑150 (MQ=255)
                                                                                                 cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAccc                                                                                                                                               <  2:566484/62‑1 (MQ=255)
                                                                                                  cccaaTCCGACCCCGGCTCAGACCACGATCAACGACTAGGTCGACACCACTACCGCGACCCTGATGGCGAGCCCGTCGG‑T‑CACCGAAGCCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                    <  1:832302/147‑1 (MQ=14)
                                                                                                  ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCACCCTTGCCCAGACGCCGGTAACCGTGAAc                                                    <  1:1759884/150‑1 (MQ=255)
                                                                                                  ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCACGTCAACT‑C‑CTGTTCGTTGCGTGAGCACTTACACCGTGACCATGAGCAATTGTGCGCAGACGCCTGTAACCGTGAAc                                                    >  1:541179/1‑150 (MQ=2)
                                                                                                    gAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCAc                                                                                                     >  2:1376995/1‑99 (MQ=38)
                                                                                                         cGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTacac                                                                                               >  2:1654531/1‑100 (MQ=39)
                                                                                                         cGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTacac                                                                                               <  1:1654531/100‑1 (MQ=38)
                                                                                                          gACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑c                                                                                                                         <  1:1935487/73‑1 (MQ=34)
                                                                                                          gACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCaa                                            >  1:828750/1‑150 (MQ=255)
                                                                                                            ccccGGCCCCGACCACGGGCTACGACGCGGTCGACACCACCACCGCGCCCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACg                                          <  1:1616589/150‑1 (MQ=14)
                                                                                                              ccGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGc                                        <  1:1216499/150‑1 (MQ=255)
                                                                                                                   tCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                    <  1:1133855/133‑1 (MQ=40)
                                                                                                                      gACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGAt                                >  2:799888/1‑150 (MQ=40)
                                                                                                                       aCCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGAtt                               >  1:586187/1‑150 (MQ=255)
                                                                                                                            gATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACg                                          >  1:1978130/1‑134 (MQ=37)
                                                                                                                              tCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCCAACGATTACCGTTg                        <  1:480712/150‑1 (MQ=255)
                                                                                                                                aaCGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                      >  2:1326789/1‑150 (MQ=255)
                                                                                                                                aaCGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGACCGTCGG‑T‑CACCGAAAGCGGCGTAATCCCTTAGAACGTGACCCTGGGCAACGCTGCCCAGAAGCAAGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                      >  2:1902560/1‑150 (MQ=14)
                                                                                                                                 aCGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAg                     >  2:1128517/1‑150 (MQ=255)
                                                                                                                                   gACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCg                   <  2:1122311/150‑1 (MQ=255)
                                                                                                                                    aCTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                  <  1:641939/150‑1 (MQ=255)
                                                                                                                                    aCTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                  <  2:208535/150‑1 (MQ=255)
                                                                                                                                      tCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGt                <  2:1317963/150‑1 (MQ=255)
                                                                                                                                         gTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCt                                                                                      <  1:209242/77‑1 (MQ=35)
                                                                                                                                           cGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAc           <  2:541179/150‑1 (MQ=255)
                                                                                                                                           cGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAc           >  2:1157775/1‑150 (MQ=255)
                                                                                                                                              tgccaccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCa        <  1:1385546/148‑1 (MQ=255)
                                                                                                                                              caccactacCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCa        <  1:1316057/150‑1 (MQ=255)
                                                                                                                                              caccactacCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCa        <  2:1172980/150‑1 (MQ=255)
                                                                                                                                               accaccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAg       <  2:735908/150‑1 (MQ=255)
                                                                                                                                                ccactaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAgg      <  1:173374/150‑1 (MQ=255)
                                                                                                                                                ccaccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                  <  2:267909/138‑1 (MQ=255)
                                                                                                                                                 cactaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGACGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAggg     >  2:211333/1‑150 (MQ=255)
                                                                                                                                                 cactaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                      <  1:838748/133‑1 (MQ=255)
                                                                                                                                                 cactaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGaa                      >  2:838748/1‑133 (MQ=255)
                                                                                                                                                 caccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                  >  1:1453856/1‑137 (MQ=40)
                                                                                                                                                 caccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg                  <  2:1453856/137‑1 (MQ=40)
                                                                                                                                                   ccaccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCa   >  1:561050/1‑150 (MQ=255)
                                                                                                                                                    caccGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCAg  >  1:1809366/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
TCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑T‑CACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCAG  >  NC_002947/195486‑195783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑