New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1419584	38 (0.710)	11 (0.270)	9/210	3.5	29.3%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	24 (0.590)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

CAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGG  >  NC_002947/1419471‑1419750                                                                                                                                                 |                                                                                                                                         cAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGGCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCtgtg                                                                                                                                    <  1:334868/150‑1 (MQ=255)     tCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                                                                                   >  1:961017/1‑147 (MQ=255)     tCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                                                                                   <  2:961017/147‑1 (MQ=255)     tCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAg                                                                                                                                >  2:163909/1‑150 (MQ=255)          ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGc                                                                                                                           <  2:884297/150‑1 (MQ=255)               tgtgGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCt                                                                                                                                       >  1:1008091/1‑133 (MQ=255)               tgtgGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCt                                                                                                                                       <  2:1008091/133‑1 (MQ=255)                  ggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                   <  1:385851/150‑1 (MQ=255)                   gtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCcgcg                                                                                                                  >  2:523332/1‑150 (MQ=255)                     gggTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGACTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTG‑TGGAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                <  2:613274/150‑1 (MQ=255)                       gTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                                             >  2:887407/1‑135 (MQ=255)                       gTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                                             <  1:887407/135‑1 (MQ=255)                             ttgtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt                                                                                                         >  1:245573/1‑149 (MQ=255)                             ttgtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt                                                                                                         <  2:245573/149‑1 (MQ=255)                                     tCGGTGGGCATTGATTTGTTTCCCTGGGTTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGTGAACCCGCTCCCACAGGTGCTG‑TGTAGTGCCTGACAGTGAAGATAACCCTGTGGGAGCGGCTTTAGCCGCGAAGAGGCCTGGCCTGCTa                                                                                                >  1:725608/1‑150 (MQ=12)                                             cATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                                             >  1:409892/1‑113 (MQ=255)                                             cATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                                             <  2:409892/113‑1 (MQ=255)                                                   tttgtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAg                                                                                  <  1:523332/150‑1 (MQ=255)                                                          cccTGGATTCTGGGTTGTCAGAGGTGGGCTCTTCTGTGTCACGCCCGCACCCCCAGGTGATGCTGC‑CTAATTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCtgt                                                                           <  1:351387/150‑1 (MQ=19)                                                          cccTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCtgt                                                                           <  1:163909/150‑1 (MQ=255)                                                            cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg                                                                         >  2:786500/1‑150 (MQ=255)                                                                  tCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGATACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt                                                                   <  1:140902/150‑1 (MQ=255)                                                                            cTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCAt                                                         <  1:786500/150‑1 (MQ=255)                                                                                               ggCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCTCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGcc                                      >  2:413227/1‑150 (MQ=255)                                                                                                    gCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTc                                 >  1:630701/1‑150 (MQ=255)                                                                                                     cccGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTCCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCg                                >  1:782310/1‑150 (MQ=255)                                                                                                      ccGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa                               >  2:281138/1‑150 (MQ=255)                                                                                                      ccGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa                               >  2:492414/1‑150 (MQ=255)                                                                                                        gCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGAcc                             >  2:1257843/1‑150 (MQ=255)                                                                                                             cacaGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTaaa                                                                    >  1:948328/1‑106 (MQ=255)                                                                                                             cacaGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTaaa                                                                    <  2:948328/106‑1 (MQ=255)                                                                                                                    aCTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTAcc                 <  1:391664/150‑1 (MQ=255)                                                                                                                      tg‑tgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCaa                                                                                          >  1:962886/1‑75 (MQ=255)                                                                                                                      tg‑tgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCaa                                                                                          <  2:962886/75‑1 (MQ=255)                                                                                                                      tg‑tgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATACAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGc               >  2:906626/1‑150 (MQ=255)                                                                                                                         tgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCtt             >  2:1207278/1‑150 (MQ=255)                                                                                                                                 gTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCa     >  2:354273/1‑150 (MQ=255)                                                                                                                                    aCGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATgg  <  1:492414/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                         CAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTG‑TGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGG  >  NC_002947/1419471‑1419750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.