New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4861197	43 (0.860)	19 (0.470)	14/218	2.1	34.6%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	37 (0.910)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA

GGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGG  >  NC_002947/4861089‑4861379                                                                                                                                                       |                                                                                                                                              ggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTTGCGGGTAAACCCGCTCCCACAAG‑GGCGACACATGCCCTAGGCAGGAGATGTAACTGTa                                                                                                                                               >  2:927706/1‑150 (MQ=255)       gggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTCGTGTGTGGTGTTCCAGGTGTCTGTTGACTGGACCGGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcg                                                                                                                                         >  1:403443‑M2/1‑144 (MQ=255)        ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGCGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                        >  1:1041719‑M2/1‑143 (MQ=255)          aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggt                                                                                                                                      >  2:1070500‑M2/1‑141 (MQ=255)              gTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttac                                                                                                                                  >  1:1065900‑M2/1‑137 (MQ=255)               tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTCGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACGCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacc                                                                                                                                 <  1:607346‑M2/150‑15 (MQ=255)                            atccaaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTCCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACGTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                    <  1:528686/146‑1 (MQ=255)                               aaaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                                                                                                                 >  2:765241/1‑150 (MQ=255)                                aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGAGATGTACCTGTAGGAGCGGGTTTACCCGCGACGAGGCCGGcac                                                                                                                >  1:192717/1‑150 (MQ=255)                                     gcagcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                              >  1:1129215‑M2/1‑114 (MQ=255)                                     gcagcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                              <  2:1129215‑M2/115‑2 (MQ=255)                                      cagcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCaa                                                                                                          <  2:975842/150‑1 (MQ=255)                                        gcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAacg                                                                                                        <  2:231912/150‑1 (MQ=255)                                                      gTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAAcc                                                                                          >  2:1012613/1‑150 (MQ=255)                                                         gggTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAacgac                                                                                                      <  1:670232/135‑1 (MQ=255)                                                         gggTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAacgac                                                                                                      >  2:670232/1‑135 (MQ=255)                                                           gTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCa                                                                                     <  1:167697/150‑1 (MQ=255)                                                            ttCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGTCCGAACACAACATCAC‑CAAGCAACGCCAGGTACCTGGGGGCTTGGATGTACCAGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAg                                                                                    >  1:655793/1‑150 (MQ=12)                                                               cAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACACGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGcgc                                                                                 >  2:363928/1‑148 (MQ=255)                                                                           gACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctg                                                                     >  1:1017692/1‑150 (MQ=255)                                                                            aCTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctgc                                                                    >  1:811514/1‑150 (MQ=255)                                                                              tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctctt                                                                  <  1:922048‑M2/150‑78 (MQ=255)                                                                                tgCCAGCCTCTTCGCTGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCtt                                                                <  2:655793/150‑1 (MQ=255)                                                                                   cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACCACCCCAAGCTGCTCttttg                                                             <  1:1012613/150‑3 (MQ=38)                                                                                   cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGACCTATCCTGGGGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGACCGGCACAAGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg                                                             >  1:32334/1‑150 (MQ=38)                                                                                               gggTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaag                                                 >  2:922048‑M2/1‑56 (MQ=255)                                                                                               gggTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTc                                                 >  2:642466/1‑150 (MQ=255)                                                                                                 gTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTCCCTGTAGGAGTGCGGGTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAg                                               <  1:907320/150‑1 (MQ=255)                                                                                                     aCCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaa                                                                                             >  2:707850‑M2/1‑50 (MQ=255)                                                                                                     aCCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaa                                                                                             <  1:707850‑M2/100‑51 (MQ=255)                                                                                                      cccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaa                                                       >  1:980468‑M2/1‑49 (MQ=255)                                                                                                      cccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggccggcacagtcaacagacacctggaaccccacgctccaccccaagctgctcttttgctttgcaagagaagacaaatc                                          <  2:920108‑M2/150‑102 (MQ=255)                                                                                                      cccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggggttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaa                                                       <  2:980468‑M2/137‑89 (MQ=255)                                                                                                      cccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCtt                                          >  2:1267339/1‑150 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                         <  1:400747‑M2/150‑103 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                         <  2:203538‑M2/150‑103 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                         <  2:133892‑M2/150‑103 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                         <  1:1242314‑M2/150‑103 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttg                                                               >  1:813531‑M2/1‑48 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttg                                                               <  2:813531‑M2/128‑81 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCGAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                         >  1:215922/1‑150 (MQ=255)                                                                                                       ccGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                         >  2:789227/1‑150 (MQ=255)                                                                                                        cGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgcttt                                                           >  2:761431‑M2/1‑47 (MQ=255)                                                                                                        cGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgcttt                                                           <  1:761431‑M2/131‑85 (MQ=255)                                                                                                          cTCCGAAAAG‑GGCGTCACGTGCCCTAGGGGGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTgg                                      <  1:1171773/150‑1 (MQ=255)                                                                                                          cTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccat                                      >  1:203538‑M2/1‑45 (MQ=255)                                                                                                             ccACAAG‑GGCGTCACATGCCCTAGGGCGGTGACGCCCTTGTGggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgac                                   <  2:951108‑M2/150‑109 (MQ=255)                                                                                                              cacaAG‑GGCGTCACATGCCCTAGGACGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGTAAACAGAGTCTGAGTCGCTGCAACCGCGTCCAGAGGCTGCTCTTTCGTCTGGATCTGTGAGCACTTCTTTGTTa                                  >  1:780666/1‑150 (MQ=12)                                                                                                               acaAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCGCGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAg                                 <  1:363928/150‑1 (MQ=255)                                                                                                                 aaG‑GGCGTCACATGCCCTCGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAgcg                               >  1:405121/1‑150 (MQ=255)                                                                                                                         tCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgcg                        <  1:642466/150‑1 (MQ=255)                                                                                                                           acaTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCt                      >  2:787713/1‑150 (MQ=255)                                                                                                                           acaTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCt                      >  2:758987/1‑150 (MQ=255)                                                                                                                             aTGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgaccgccgaaacccgtat                    >  2:400747‑M2/1‑27 (MQ=255)                                                                                                                             aTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTgg                                      <  1:1268997/132‑1 (MQ=255)                                                                                                                             aTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTgg                                      >  2:1268997/1‑132 (MQ=255)                                                                                                                              tGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggccggcacagtcaacagacacctggaaccccacgctccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgaccgccgaaacccgtatc                   >  1:920108‑M2/1‑26 (MQ=255)                                                                                                                               gCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGTCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTc                                                              >  2:1135038/1‑106 (MQ=255)                                                                                                                               gCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGTCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTc                                                              <  1:1135038/106‑1 (MQ=255)                                                                                                                                  cTAGGGCGGTGATGTACCTGTAggagcgggtttac                                                                                                                                  <  2:1173959‑M2/35‑14 (MQ=255)                                                                                                                                  cTAGGGCGGTGATGTACCTGTAggagcgggtttac                                                                                                                                  >  1:1173959‑M2/1‑22 (MQ=255)                                                                                                                                  cTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTc               >  1:419318/1‑150 (MQ=255)                                                                                                                                    ggggCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcga             <  2:329294/149‑1 (MQ=255)                                                                                                                                     gggCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcgac            <  2:1017692/150‑1 (MQ=255)                                                                                                                                       gCGGTGATGTACCTGTAGGAGCGGGTTTACCCGAGTGGAGTCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcgacga          >  1:613389/1‑150 (MQ=255)                                                                                                                                               gTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTgg  >  1:1058758/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                              GGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAG‑GGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGG  >  NC_002947/4861089‑4861379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.