| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 964991 = | 27 (1.670) | 3 (0.190) | 3/250 | NT | 10.3% | coding (794/828 nt) | phnE | phosphonate ABC transporter permease |
| ? | NC_002947 | 965023 = | 26 (1.650) | coding (826/828 nt) coding (2/768 nt) |
phnE ptxC |
phosphonate ABC transporter permease phosphonate transport system permease PtxC |
|||||
CCATCTGCCCCAGCCCGCCATTGCCGACCAGTGCGTGCAGGTCCAGCTGCAGATACGCGAACGAGGCCACCGCCGCTGCCACGATGGCGCCCAGCAACACCCAGTTGATCACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/965142‑964991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTGAACCGGGTGATCAACTGGGTGTTGCTGGGCGCCATCGTGGCAGCGGCGGTGGCCTCGTTCGCGTATCTGCAGCTGGACCTGCACGCACTGGTCGGCAATGGCGGGCTG > NC_002947/965023‑965132 CCATCTGCCCCAGCCCGCCATTGCCGACCAGTGCGTGCAGGTCCAGCTGCAGATACGCGAACGAGGCCACCGCCGCTGCCACGATGGCGCCCAGCAACACCCAGTTGATCACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAG < 1:321134/150‑1CCATCTGCCCCAGCCCGCCATTGCCGACCAGTGCGTGCAGGTCCAGCTGCAGATACGCGAACGAGGCCACCGCCGCTGCCACGATGGCGCCCAGCAACACCCAGTTGATCACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAG > 2:342718/1‑150 ACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAGCATGAACCGGGTGATCAACTGGGTGTTGCTGGGCGCCATCGTGGCAGCGGCGGTGGCCTCGTTCGCGTATCTGCAGCTGGACCTGC < 1:409831/126‑1 ACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAGCATGAACCGGGTGATCAACTGGGTGTTGCTGGGCGCCATCGTGGCAGCGGCGGTGGCCTCGTTCGCGTATCTGCAGCTGGACCTGC > 2:409831/1‑126 CCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAGCATGAACCGGGTGATCAACTGGGTGTTGCTGGGCGCCATCGTGGCAGCGGCGGTGGCCTCGTTCGCGTATCTGCAGCTGGACCTGCACGCACTGGTCGGCAATGGCGGGCTG > 2:300986/1‑150 CCATCTGCCCCAGCCCGCCATTGCCGACCAGTGCGTGCAGGTCCAGCTGCAGATACGCGAACGAGGCCACCGCCGCTGCCACGATGGCGCCCAGCAACACCCAGTTGATCACCCGGTTCATGCCAGCCTCCAGCGCAGCAGGCGGCTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/965142‑964991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTGAACCGGGTGATCAACTGGGTGTTGCTGGGCGCCATCGTGGCAGCGGCGGTGGCCTCGTTCGCGTATCTGCAGCTGGACCTGCACGCACTGGTCGGCAATGGCGGGCTG > NC_002947/965023‑965132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |