New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1964564 =	17 (1.050)	3 (0.200)	3/238	NT	16.8%	coding (733/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
	?	NC_002947	1964605 =	14 (0.930)					coding (774/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase

GTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1964713‑1964564 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCC  >  NC_002947/1964605‑1964750                                                                                                                                                                                                                                                                                                          GTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGC                                                                                                                                                    >  1:155778/1‑150                                                                                                          AAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAAC                                                                      >  1:327541/1‑123                                                                                                          AAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAAC                                                                      <  2:327541/123‑1                                                                                                              GCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAAC                                       >  2:104364/1‑150                                                                                                                                                   AGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCC  >  2:131010/1‑150                                                                                                                                                                                                                                                                                                          GTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1964713‑1964564 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCC  >  NC_002947/1964605‑1964750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.