New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 315386611 (0.680)3 (0.190) 3/244 NT 19.7% coding (27/1326 nt) PP_2770 hypothetical protein
?NC_002947 = 3153911 14 (0.910)coding (72/1326 nt) PP_2770 hypothetical protein

CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3153769‑3153866
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA  <  NC_002947/3153911‑3153856
                                                                                                                                                          
CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCG      <  1:222320/150‑1
                                            CCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA  <  1:45686/110‑1
                                            CCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA  >  2:45686/1‑110
                                                                                                                                                          
CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3153769‑3153866
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA  <  NC_002947/3153911‑3153856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.