New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4744213 =	15 (0.930)	3 (0.190)	3/246	NT	18.5%	coding (658/813 nt)	PP_4198	OmpA family protein
	?	NC_002947	4744257 =	12 (0.770)					coding (614/813 nt)	PP_4198	OmpA family protein

TCTCAAGCTGTCGCGCGACCGGGCGCAGTCCGTGGCTGACATGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4744259‑4744213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgAGATTCTCCTCGCCCGCGCCAGTACTGTCGGTATAGCCCTCAATACGCACTACCCGGCGCGGGTTGAGCTGCAGGAACTGCACCAGCTTGAGCACAGTCCGGC  >  NC_002947/4744257‑4744359                                                                                                                                                        TCTCAAGCTGTCGCGCGACCGGGCGCAGTCCGTGGCTGACATGCTTGAGATTCTCCTCGCCCGCGCCAGTACTGTCGGTATAGCCCTCAATACGCACTACCCGGCGCGGGTTGAGCTGCAGGAACTGCACCAGCTTGAGCACAGTCCGGC  >  2:2773/1‑150  CTCAAGCTGTCGCGCGACCGGGCGCAGTCCGTGGCTGACATGCTTGAGATTCTCCTCGCCCGCGCCAGTACTGTCGGTATAGCCCTCAATACGCACTACCCGGCGCGGGTTGAGCTGCAGGAACTGCACCAGCTTGAG             >  1:73008/1‑138  CTCAAGCTGTCGCGCGACCGGGCGCAGTCCGTGGCTGACATGCTTGAGATTCTCCTCGCCCGCGCCAGTACTGTCGGTATAGCCCTCAATACGCACTACCCGGCGCGGGTTGAGCTGCAGGAACTGCACCAGCTTGAG             <  2:73008/138‑1                                                                                                                                                        TCTCAAGCTGTCGCGCGACCGGGCGCAGTCCGTGGCTGACATGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4744259‑4744213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgAGATTCTCCTCGCCCGCGCCAGTACTGTCGGTATAGCCCTCAATACGCACTACCCGGCGCGGGTTGAGCTGCAGGAACTGCACCAGCTTGAGCACAGTCCGGC  >  NC_002947/4744257‑4744359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.