New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5140177 =	23 (1.420)	4 (0.260)	4/246	NT	14.5%	coding (1221/1380 nt)	PP_4524	sodium‑solute symporter
	?	NC_002947	5140211 =	25 (1.610)					coding (1255/1380 nt)	PP_4524	sodium‑solute symporter

CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5140330‑5140177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG  >  NC_002947/5140211‑5140322                                                                                                                                                                                                                                                                            CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACAT                                                                                                                      >  2:264195/1‑150     TTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG                                                                                                                  <  1:39018/150‑1                                                                      CAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG                                                                                                                  >  1:317305/1‑85                                                                      CAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG                                                                                                                  <  2:317305/85‑1                                                                                                                       AACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG  >  1:234371/1‑148                                                                                                                       AACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG  <  2:234371/148‑1                                                                                                                          AGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGC                                    <  1:331287/111‑1                                                                                                                          AGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGC                                    >  2:331287/1‑111                                                                                                                                                                                                                                                                            CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5140330‑5140177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG  >  NC_002947/5140211‑5140322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.