| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5895316 | 24 (1.480) | 5 (0.330) | 5/242 | NT | 17.3% | coding (86/873 nt) | cysW | sulfate ABC transporter permease CysW |
| ? | NC_002947 | = 5895363 | 25 (1.630) | coding (39/873 nt) | cysW | sulfate ABC transporter permease CysW | |||||
GCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5895188‑5895316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaaCGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGATATTC < NC_002947/5895363‑5895216 GCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGTCAGCAGCAGGAACAGGGCGAACACCAGCCAGC > 1:389243/1‑126GCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGTCAGCAGCAGGAACAGGGCGAACACCAGCCAGC < 2:389243/126‑1 CTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTG < 1:412572/150‑1 AGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTT < 1:381245/136‑1 AGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTT > 2:381245/1‑136 AAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGG > 1:210964/1‑136 AAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGG < 2:210964/136‑1 CAGCCAACGCCGCCCGCCGTGGCAGCGCCCCGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGA < 2:49678/150‑1 CAGCCAACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGA > 2:80708/1‑150 AACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGATATTC < 2:265913/150‑1 AACGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGATATTC < 2:309684/150‑1 GCTTCAGCGCCGACAACGCATCGGGTTCGAATATCGCCTCGAAGAAGGTGCCAAAACCGTTCTTCAGCGCCTGCGATACCACGATCACCAGCGGCAGCAGCAGGAACAGGGCGAACACCAGCCAGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5895188‑5895316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaaCGCCGCCCGCCGTGGCAGCGCCACGTCACGGCGTATCCTGATCGGCCTTGGCTGGCTGGTGTTCGCCCTGTTCCTGCTGCTGCCGCTGGTGATCGTGGTATCGCAGGCGCTGAAGAACGGTTTTGGCACCTTCTTCGAGGCGATATTC < NC_002947/5895363‑5895216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |