| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5162643 | 16 (0.990) | 4 (0.310) | 4/204 | NT | 28.8% | intergenic (+118/+83) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| ? | NC_002947 | = 5162675 | 7 (0.540) | intergenic (+150/+51) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
GTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGC > NC_002947/5162502‑5162787 | gTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATcacca > 2:377020/1‑150 (MQ=255) aCCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGa > 1:234163/1‑150 (MQ=255) tGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCt < 2:377513/150‑1 (MQ=255) aaGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACcaca < 2:424596/137‑1 (MQ=255) aaGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACcaca > 1:424596/1‑137 (MQ=255) aaGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACt > 1:118552/1‑150 (MQ=255) gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc < 2:255207/150‑1 (MQ=255) aaCACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc > 1:102951/1‑148 (MQ=255) aaCACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc < 2:102951/148‑1 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGCAGTGCCGACCCCATCCGGCGTTTCCCGCGTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgg > 1:11733‑M1/1‑112 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCTTTGGTTTCGGTTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgg < 2:11733‑M1/150‑39 (MQ=255) gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgg > 2:391003‑M2/1‑121 (MQ=255) gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgg < 1:391003‑M2/133‑13 (MQ=255) ggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagtgggcaa > 1:112808‑M1/1‑88 (MQ=255) ggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagtgggcaa < 2:112808‑M1/136‑49 (MQ=255) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGTCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCACGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCtt > 2:266485/1‑150 (MQ=255) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg > 1:64782/1‑120 (MQ=255) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg < 2:64782/120‑1 (MQ=255) ttttGTCTGTGTGAAATGCGCCGTCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGTGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAg < 1:133868/150‑1 (MQ=255) ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtg > 2:319107‑M2/1‑48 (MQ=255) ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtg < 1:319107‑M2/53‑6 (MQ=255) ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg > 1:50048/1‑150 (MQ=255) ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg < 2:50048/150‑1 (MQ=255) ttGCCCACTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcc > 1:112808‑M2/1‑48 (MQ=255) ttGCCCACTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcc < 2:112808‑M2/136‑89 (MQ=255) cccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGACAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc > 1:399557/1‑150 (MQ=255) ccGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttccc < 1:391003‑M1/133‑122 (MQ=255) ccGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttccc > 2:391003‑M1/1‑12 (MQ=255) ccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagacgcgggaaacgccggatggggtcggcactgcccgcttcaggtgaagcagagcaggg > 1:11733‑M2/1‑38 (MQ=255) ccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaaaccgaaaccaaagccggatggggtcggcgtttcccgcttcaggtgaagcagagcaggg < 2:11733‑M2/150‑113 (MQ=255) cacaGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaa > 2:319107‑M1/1‑5 (MQ=255) cacaGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaa < 1:319107‑M1/53‑49 (MQ=255) | GTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGC > NC_002947/5162502‑5162787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |