| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 16 (0.990) | 7 (0.580) | 7/190 | NT | 52.1% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 1 (0.080) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
CCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAG > NC_002947/6032663‑6032920 | ccAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTctt < 1:419931/150‑3 (MQ=255) gaagcgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg > 1:290652‑M1/142‑148 (MQ=255) gaagcgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg < 2:290652‑M1/7‑1 (MQ=255) gcTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGc < 2:41030/150‑1 (MQ=255) gattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAggg > 2:75537‑M1/124‑150 (MQ=255) ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGcc > 2:345383/1‑150 (MQ=255) ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGcc < 2:300025/150‑1 (MQ=255) cgACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGa < 1:345383/150‑1 (MQ=255) ggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt < 2:399500‑M1/61‑1 (MQ=255) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg > 2:85370/1‑95 (MQ=255) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg < 1:85370/95‑1 (MQ=255) tgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtaccggcctcTTCGCGGGTAAACCCGCTCCTACATGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAg < 2:147097‑M1/63‑1 (MQ=255) cAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTc > 2:113048/1‑106 (MQ=255) cAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTc < 1:113048/106‑1 (MQ=255) gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg < 1:106764/150‑1 (MQ=255) gTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgg < 1:7180/99‑1 (MQ=255) gTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgg > 2:7180/1‑99 (MQ=255) tACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgggg < 1:442778/100‑1 (MQ=255) tACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgggg > 2:442778/1‑100 (MQ=255) gcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGGTTACCCGCGAAAGGGCCCGTACTGACCCta > 1:444564/1‑150 (MQ=255) agggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAgg > 2:196992‑M1/40‑65 (MQ=255) agggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAgg < 1:196992‑M1/26‑1 (MQ=255) ggagtactgagagccttatagggtcagtaccggcctcTTCGCGGGTAAACCCGCTCCTACATGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAg > 1:147097‑M1/38‑150 (MQ=255) ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAg > 2:1821/1‑118 (MQ=255) ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAg < 1:1821/118‑1 (MQ=255) actgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa < 1:310266‑M1/54‑1 (MQ=255) actgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa > 2:310266‑M1/33‑86 (MQ=255) ttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa < 2:26297‑M1/54‑1 (MQ=255) ttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa > 1:26297‑M1/23‑76 (MQ=255) | CCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAG > NC_002947/6032663‑6032920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |