| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 386633 = | 25 (1.540) | 3 (0.190) | 3/252 | NT | 12.6% | intergenic (‑95/‑231) | ltaE/glyA‑I | low specificity l‑threonine aldolase/serine hydroxymethyltransferase |
| ? | NC_002947 | 386722 = | 17 (1.070) | intergenic (‑184/‑142) | ltaE/glyA‑I | low specificity l‑threonine aldolase/serine hydroxymethyltransferase | |||||
CATCGATTCAGCACTTGCCTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAA > NC_002947/386578‑386864 | gcctgcgcacgccttgcaatggcgcgtttacgacattcgctgttgtgctgtttgcGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAAc > 1:438138‑M1/56‑150 (MQ=255) aTCGATTCAGCACTTGCCTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACa > 1:270855/1‑150 (MQ=255) gATTCAGCACTTGCCTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGca < 1:252928/150‑1 (MQ=255) cTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGca < 1:168424/136‑1 (MQ=255) cTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGca > 2:168424/1‑136 (MQ=255) tGTTCATTACTGTGCCGGCCCCTTACCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAACGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTg > 1:150704/1‑150 (MQ=255) aTTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTCTAGGAGCGGGTTCACCCGAGAAAGGGCCAGCGCAAACAGCACAACAGCGAATATCGTAAACGCGCCATTTCAAGGCGTGCGCAg > 2:165926/1‑150 (MQ=255) gtttgcgctggccctttcgcgggtgaacccgctcctacagtgattggcgtttgcaggaccattgtgggggcgggcgcgcccgcgaaggggccggcGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGc > 1:438138‑M2/96‑150 (MQ=255) tgtgCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATc < 2:270855/150‑1 (MQ=255) cTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGccc < 2:156303/150‑1 (MQ=255) gcgcgcCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAACGGAAATCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTc < 1:342558/150‑1 (MQ=255) cgcccCCACATTTGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACAt < 1:242084/150‑1 (MQ=255) aTGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATaa > 1:170495/1‑137 (MQ=255) aTGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATaa < 2:170495/137‑1 (MQ=255) tgattggcgtttgcaggaccattgtgggggcgggcgcgcccgcgaaggggccggcGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATaa > 1:75146‑M2/56‑136 (MQ=255) tgattggcgtttgcaggaccattgtgggggcgggcgcgcccgcgaaggggccggcGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATaa < 2:75146‑M2/81‑1 (MQ=255) aaaCGCCAAATACTGTAGGAGCGGGTTCATCTGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACACGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTg > 2:47860/1‑150 (MQ=255) ccAATCACTGTAGGAGCGAGTTGACTCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACACGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCa > 2:181304/1‑150 (MQ=255) cgcgAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGgag > 2:121641/1‑150 (MQ=255) cgAAAGGGCCAGCGCAAACCGCACACCAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGCTCGCTGCCGGGAGAt < 1:165926/150‑1 (MQ=255) aaGGGCCCGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCTCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATaca < 1:339750/150‑1 (MQ=255) ggccggcGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACaa < 2:438138‑M2/143‑1 (MQ=255) | CATCGATTCAGCACTTGCCTATACAACCCGTGCAGCGATTTCTGTTCATTACTGTGCCGGCCCCTTCGCGGGCGCGCCCGCCCCCACAATGGTCCTGCAAACGCCAATCACTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAA > NC_002947/386578‑386864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |