New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 808878	11 (0.680)	3 (0.200)	3/238	NT	19.9%	coding (483/1335 nt)	PP_0695	hypothetical protein
	?	NC_002947	= 808918	14 (0.930)					coding (443/1335 nt)	PP_0695	hypothetical protein

GACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGCC  >  NC_002947/808773‑809036                                                                                                                                                  |                                                                                                                       gACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgag                                                                                                                    <  1:307445‑M2/150‑5 (MQ=255)    gTATTCGTCCCAGGTGGACAGCACAACAGCATAAGGATGATGAAGTAAATTCTAGCGTGTGCGTGTTGTTGCCCGTTCGGCTACGGCCCCCAGTGCCTGCTAGTCGTTGTCGCGCTTTTTCAGCACATTGCGCACGCGCATGTCGAGCAg                                                                                                                 <  2:97873/150‑1 (MQ=255)                                                              gtGCGGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGGTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGGGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGc                                                       <  2:85041/149‑1 (MQ=255)                                                                      cTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAg                                               >  1:414198/1‑150 (MQ=255)                                                                          gCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGc                                                                                                      <  1:291442/91‑1 (MQ=255)                                                                          gCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGc                                                                                                      >  2:291442/1‑91 (MQ=255)                                                                           cccGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGgcgc                                           >  1:397167/1‑149 (MQ=255)                                                                           cccGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGgcgc                                           <  2:397167/149‑1 (MQ=255)                                                                                   gccacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTgg                                  >  1:363999/1‑150 (MQ=255)                                                                                    ccacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGgc                                 <  2:363999/150‑1 (MQ=255)                                                                                     cacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGgcg                                >  1:16557/1‑150 (MQ=255)                                                                                                   ccTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttat                                               <  1:44431‑M2/121‑74 (MQ=255)                                                                                                   ccTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttat                                               >  2:44431‑M2/1‑48 (MQ=255)                                                                                                    cTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttatgccgaagtgctggccacctgggacgaatac                 <  1:225174‑M2/150‑104 (MQ=255)                                                                                                                   gAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGcc  >  1:178246/1‑150 (MQ=255)                                                                                                                       tttttCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTg                                                                                     >  2:190604/1‑63 (MQ=255)                                                                                                                       tttttCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTg                                                                                     <  1:190604/63‑1 (MQ=255)                                                                                                                                   tCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCg                   >  1:71476/1‑117 (MQ=255)                                                                                                                                   tCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCg                   <  2:71476/117‑1 (MQ=255)                                                                                                                                                  |                                                                                                                       GACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGCC  >  NC_002947/808773‑809036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.