| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1219553 = | 15 (0.930) | 4 (0.260) | 4/244 | NT | 25.6% | coding (1084/1137 nt) | PP_1064 | alpha/beta family hydrolase |
| ? | NC_002947 | 1219580 = | 9 (0.580) | coding (1111/1137 nt) | PP_1064 | alpha/beta family hydrolase | |||||
CGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCACCCACACAGTCACCAGCACGGTCGCGGCGATCAGCCAGGCCACTGTGGCCAGCGCCATCGAAGCCTCGAG > NC_002947/1219437‑1219707 | cGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCa < 2:355418/150‑1 (MQ=255) gTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACg > 2:332895/1‑150 (MQ=255) ggccacagtggcctggctgatcgccgcgaccgtgctggtgactgtgtgggtgcggatgcactgagcgaaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATc > 2:234231‑M1/109‑150 (MQ=255) tatCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCCCAGGGCCGAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGGCACTCACATCGCAGGGCTCTGAATCGGCGTCGa > 2:63060/1‑150 (MQ=255) aGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑Ca < 1:314251/150‑1 (MQ=255) ttGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCAcc < 1:332895/150‑1 (MQ=255) cgcACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCACCCACACAGTCACCAGCa > 1:168937/1‑150 (MQ=255) aaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAaga < 1:158340‑M1/29‑1 (MQ=255) aaatcgacgccgattcagagccctgcgatgtgcgtgacctcTTGCCTTATTTGCAGGCGCACAGGCAaga > 2:158340‑M1/42‑70 (MQ=255) cgcCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCa < 1:439366/65‑1 (MQ=255) cgcCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCa > 2:439366/1‑65 (MQ=255) gatgtgcgtgacctcttgcctgtgcgcctgcaaataaggcaaGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCACCCACACAGTCACCAGCACGGTCGCGGCGATCAGCCAGGCCACTGTGGcc > 2:234231‑M2/43‑150 (MQ=255) tcttgcctgtgcgcctgcaaataaggcaaGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGAttt < 1:158340‑M2/41‑1 (MQ=255) tcttgcctgtgcgcctgcaaataaggcaaGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGAttt > 2:158340‑M2/30‑70 (MQ=255) ctgtgcgcctgcaaataaggcaaGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCACCCACACAGTCACCAGCACGGTCGCGGCGATCAGCCAGGCCACTGTGGCCAGCGCCATCGAAGCCTCGa < 1:234231‑M2/127‑1 (MQ=255) ttATTTGCAGGCGCACAAGCAAGCCGTCCCGCATATCGCAGTGCTCTGAATCGGCGCCGTTTTC‑CTAAATGCCACCCGCACCCACCCAGTCACCAGCACGGTCGCGGCGATCAGCCAGGCCACTGTGGCCAGCGCCATCGAAGCCTCGAg < 1:77655/150‑1 (MQ=255) | CGGTGATGCATGGCGTGCACTTGGCGGCGCATATCCGGGGCAGCCAGTTGCGCTTGATCCCGGGGCTGGCGCACCGTTTCCAGGAGCCGTTCAAGGCGCCGTTACTGGGGGCGGTGTTGCCTTATTTGCAGGCGCACAGGCAAGAGGTCACGCACATCGCAGGGCTCTGAATCGGCGTCGATTTCGCTCAGTG‑CATCCGCACCCACACAGTCACCAGCACGGTCGCGGCGATCAGCCAGGCCACTGTGGCCAGCGCCATCGAAGCCTCGAG > NC_002947/1219437‑1219707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |