New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1426221 =	NA (NA)	3 (0.200)	3/242	NT	100%	coding (112/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	1430033 =	0 (0.000)					coding (64/1422 nt)	PP_1252	group II intron‑encoding maturase

CCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGT  >  NC_002947/1429924‑1430182                                                                                                              |                                                                                                                                                       tgaccacgcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcacggacgccgtcgatacctttgcACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGcc                                                                                                                >  2:376879‑M2/110‑150 (MQ=255)        gcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcacggacgccgtcgatacctttgcACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGt                                                                                                         <  1:376879‑M2/48‑1 (MQ=255)             gatacgcacgcctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcgctgacgccgccggcacctttgcACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCaaa                                                                                                    <  1:19643‑M2/53‑1 (MQ=255)                                                                                                              aCTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGCACG‑GCGCGGACGCGGCGCCGGACAAGCTGAGAGGACGTGGGCCCGCAGCGGGCACCCTCAGACGTGCGAATCAACgt  >  1:321469/1‑150 (MQ=2)                                                                                                              ACTGTCATCCCGAGCTCCGGCCAGAAGCCGGGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACgt  <  2:270546‑M2/150‑1 (MQ=255)                                                                                                              |                                                                                                                                                       CCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGT  >  NC_002947/1429924‑1430182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.