New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4537596 =	NA (NA)	5 (0.310)	5/252	NT	62.9%	coding (887/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4626705	3 (0.190)					coding (845/1533 nt)	PP_4091	transposase

ACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAACAGCACGACTTGTCGATCAGGCGGGCCACTGGCCTGCACCCACATCCAGGATTGACTGGTCGGATCACGATCCGGCTCTTTGAGCACCTGCACGCGAGTTTCATCGCAATGGATCACCGGGCTT  >  NC_002947/4626563‑4626839                                                                                                                                               |                                                                                                                                       aCGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATc                                                                                                                                 <  1:361915/150‑1 (MQ=32)    ccGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa                                                                                                                              >  2:325941/1‑150 (MQ=32)     cGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAAc                                                                                                                             >  2:371738/1‑150 (MQ=32)                                                                                      aCGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGgctatcgcggttacgtgatgaccgatgattacgccggttacaacgcgttggcgctacagccgggcgttgaacgactggcgtgcatggcgcat                                            <  1:412475‑M2/150‑93 (MQ=255)                                                                                      aCGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGgctatcgcggttacgtgatgaccgatgattacgccggttacaacgcgttggcgctacagccgggcgttgaacgactggcgtgcatggcgcat                                            >  2:412475‑M2/1‑58 (MQ=255)                                                                                                     cccTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGgctatcgcggttacgtgatgaccgatgattacgccggttacaacgcgttggcgctacagccgggcgttgaacgactggcgtgcatggcgcatgtccggcgtaaattc                             <  1:232312‑M2/150‑108 (MQ=255)                                                                                                      ccTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGagggctctcgcggttaagtgatgaccgatgattacgccggttacaacgcgttggcgctacagccgggcgttgaacgactggcgtgcatggcgcatgtccggcgtaaat                            <  1:54811‑M2/150‑109 (MQ=255)                                                                                                                                tGCGCGCGGCTGGTGGgctatcgcggttacgtgatgaccgatgattacgccggttacaacgcgttggcgctacagccgggcgttgaacgactggcgtgcatggcgcatgtccggcgtaaattcgtcgaagcgcagaaggtgcagcctaag  >  2:232312‑M2/1‑16 (MQ=255)                                                                                                                                               |                                                                                                                                       ACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAACAGCACGACTTGTCGATCAGGCGGGCCACTGGCCTGCACCCACATCCAGGATTGACTGGTCGGATCACGATCCGGCTCTTTGAGCACCTGCACGCGAGTTTCATCGCAATGGATCACCGGGCTT  >  NC_002947/4626563‑4626839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.