New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5877040 =	20 (1.240)	3 (0.230)	3/208	NT	19.2%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	9 (0.680)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein

CTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGC  >  NC_002947/5876987‑5877266                                                                                                                                        |                                                                                                                                                 ctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGc                                                                                                                                    <  1:394949/150‑1 (MQ=255)               cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCATGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCgg                                                                                                                      >  1:316050/1‑150 (MQ=255)                                 ccTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGaa                                                                                                    >  1:258725/1‑150 (MQ=255)                                              tAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                   <  2:304406/138‑1 (MQ=255)                                              tAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                   >  1:304406/1‑138 (MQ=255)                                                            ggtaaacccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                   <  2:75115‑M2/48‑1 (MQ=255)                                                            ggtaaacccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                   >  1:75115‑M2/77‑124 (MQ=255)                                                                 ACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAg                                                                                                      <  2:99206‑M1/116‑1 (MQ=255)                                                                 ACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAg                                                                                                      >  1:99206‑M1/1‑116 (MQ=255)                                                                         CTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCa                                                            >  1:440366‑M1/1‑150 (MQ=255)                                                                          TACAAGGTACCCCACCGGCCTGGAACCGGAACGATCCCTGTAGCAGCGGGTTTACCCGCGAAGAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCGTGAAAACATAGGACAGGTTGGGCATAGTGACCAGGTAAATGGTCCCCGCTTCAt                                                           <  1:125160‑M1/150‑1 (MQ=255)                                                                             agggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTaatcca                                                        >  2:255463‑M2/60‑150 (MQ=255)                                                                                  aCCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCa                                                   >  2:144806/1‑150 (MQ=255)                                                                                             cTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt                                                 >  2:149290/1‑141 (MQ=255)                                                                                             cTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt                                                 <  1:149290/141‑1 (MQ=255)                                                                                                  aCCGTGCCGCTCCCTGTAGGAGCGGGTTTACCCGCGAACACCCCCAGCCGGCCGAGGATGCAGTCGGCTGCTCGCACCCATAGATCAGGTCCGGCTCAATGCCCAGGTAAATGGTCCCCGCTTCATCCACCGCAATCCCCTCCGCCTGCg                                   <  2:125160/150‑1 (MQ=255)                                                                                                                   aggagcgggattccccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGACCACGTGGATGAGGGTCGACTCCCTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAAc                  <  1:144806‑M2/129‑1 (MQ=255)                                                                                                                       gcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCt              >  1:282496‑M2/18‑150 (MQ=255)                                                                                                                                  cgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAc        >  1:304793‑M2/7‑145 (MQ=255)                                                                                                                                  cgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAc        <  2:304793‑M2/139‑1 (MQ=255)                                                                                                                                   gcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTgc  >  1:25982‑M2/6‑150 (MQ=255)                                                                                                                                        |                                                                                                                                                 CTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGC  >  NC_002947/5876987‑5877266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.