Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3363716	3363785	70	2 [1]	[1] 2	PP_2960	transcriptional regulator, AraC family

CGGCGCCAACAATCCGCTGACCCTGGCTTTGCCGGACTTCATCATCAAGCCCCTCGGCGAATTGCAAGGCCTTGATGGCACCCTTGACTGGCTGTTCGAAGAAGCCTTTGGAGATGAGTGTGGTCGTGATGTCATTCTCAATCGCTTGTTCGAGC  >  NC_002947/3363781‑3363935      |                                                                                                                                                      cggcgCCAACAATCCGCTGACCCTGGCTTTGCCGGACTTCATCATCAAGCCCCTCGGCGAATTGCAAGGCCTTGATGGCACCCTTGACTGGCTGTTCGAAGAAGCCTTTGGAGATGAGTGTGGTCGTGATGTCATTCTCAATCGCTTGtt       >  1:142920/1‑150 (MQ=255)      ccAACAATCCGCTGACCCTGGCTTTGCCGGACTTCATCATCAAGCCCCTCGGCGAATTGCAAGGCCTTGATGGCACCCTTGACTGGCTGTTCGAAGAAGCCTTTGGAGATGAGTGTGGTCGTGATGTCATTCTCAATCGCTTGTTCGAGc  >  1:161583/1‑150 (MQ=255)      |                                                                                                                                                      CGGCGCCAACAATCCGCTGACCCTGGCTTTGCCGGACTTCATCATCAAGCCCCTCGGCGAATTGCAAGGCCTTGATGGCACCCTTGACTGGCTGTTCGAAGAAGCCTTTGGAGATGAGTGTGGTCGTGATGTCATTCTCAATCGCTTGTTCGAGC  >  NC_002947/3363781‑3363935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑