BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	4,964,714	C→G	R230P (CGT→CCT)	fleQ ←	transcriptional regulator FleQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,964,714	0	C	G	100.0%	452.1 / NA	132	R230P (CGT→CCT)	fleQ	transcriptional regulator FleQ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (67/65); total (67/65)

Only 100 of 132 total aligned reads displayed.

ATGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCACGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTACCAC  >  NC_002947/4964570‑4964859

aTGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTg                                                                                                                                              >  2:256492/1‑150 (MQ=255)

 tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg                                                                                                                                             <  2:87349/150‑1 (MQ=255)

 tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg                                                                                                                                             <  2:3194513/150‑1 (MQ=255)

 tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg                                                                                                                                             <  2:3720244/150‑1 (MQ=255)

         gTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGTATAGCGCCGATTTCGTCGAGGAACAGGGTACAGCCGTTGGCCACTTCGAAACGCCCGGAAGGGCTGGTGATCGcc                                                                                                                                     >  1:2712761/1‑150 (MQ=38)

          tCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGa                                                                                                                                          <  1:3487946/144‑1 (MQ=255)

            ttgttgCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCg                                                                                                                                  <  2:2429382/150‑1 (MQ=255)

            ttgttgCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCg                                                                                                                                  <  1:1490596/150‑1 (MQ=255)

             tgttgCGACCGACGCGCTCGAAGGTACGCTCCGGCAGCACACGCAGCAGCTTTACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGGTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCgg                                                                                                                                 <  2:881788/150‑1 (MQ=38)

                   tACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAGACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAgg                                                                                                                           <  2:1127103/150‑1 (MQ=255)

                    aCCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGgc                                                                                                                          <  2:313807/150‑1 (MQ=255)

                       cACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGcc                                                                                                                       >  1:799670/1‑150 (MQ=255)

                        aCGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGATTTCCCCAAAGGAGGTTATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGccc                                                                                                                      <  2:1976974/150‑1 (MQ=255)

                        aCGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGccc                                                                                                                      >  1:623987/1‑150 (MQ=255)

                          gcgcTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCtt                                                                                                                    >  1:2470098/1‑150 (MQ=255)

                            gcTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGgcgc                                                                                                                        >  2:360068/1‑144 (MQ=255)

                            gcTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGgc                                                                                                                          <  2:3760239/142‑1 (MQ=255)

                            gcTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGgc                                                                                                                          >  1:3760239/1‑142 (MQ=255)

                             cTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTtctc                                                                                                                 <  1:1247243/150‑1 (MQ=255)

                              tCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGc                                                                                                                                                >  1:2390113/1‑118 (MQ=255)

                                gAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              <  2:623987/150‑1 (MQ=255)

                                gAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              >  2:1134482/1‑150 (MQ=255)

                                gAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              >  2:1797568/1‑150 (MQ=255)

                                  aGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGc                                                                                                            >  1:2176095/1‑150 (MQ=255)

                                  aGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGc                                                                                                            <  1:63011/150‑1 (MQ=255)

                                      aCGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        <  1:1134482/150‑1 (MQ=255)

                                      aCGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        <  2:154603/150‑1 (MQ=255)

                                        gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACa                                                                                                      <  1:2165968/150‑1 (MQ=255)

                                        gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACa                                                                                                      >  2:1303705/1‑150 (MQ=255)

                                        gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACa                                                                                                      >  2:1347852/1‑150 (MQ=255)

                                        gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACa                                                                                                      >  1:1428885/1‑150 (MQ=255)

                                        gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATAGGCCAACGCCTGTCTCCGTCACCGTCGAGGAACAGGCGACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACa                                                                                                      >  1:2897823/1‑150 (MQ=255)

                                          tCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGt                                                                                                    >  2:3526406/1‑150 (MQ=255)

                                             tGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGc                                                                                                            >  2:107840/1‑139 (MQ=255)

                                             tGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGc                                                                                                            <  1:107840/139‑1 (MQ=255)

                                              gcagcaCACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        <  2:2326728/142‑1 (MQ=255)

                                              gcagcaCACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        >  1:2326728/1‑142 (MQ=255)

                                              gcagcaCACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGc                                                                                                >  1:1675828/1‑150 (MQ=255)

                                                agcaCACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCtt                                                                                              >  1:3074725/1‑150 (MQ=255)

                                                 gcaCACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCttt                                                                                             >  1:2086433/1‑150 (MQ=255)

                                                     acGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTc                                                                                            <  2:3535529/147‑1 (MQ=255)

                                                     acGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTc                                                                                            >  1:3535529/1‑147 (MQ=255)

                                                      cGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcagc                                                                                        <  1:1234835/150‑1 (MQ=255)

                                                       gcagcaGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              <  1:3032050/127‑1 (MQ=255)

                                                       gcagcaGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              >  2:3032050/1‑127 (MQ=255)

                                                       gcagcaGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcagca                                                                                       >  1:1152397/1‑150 (MQ=255)

                                                          gcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTaaa                                                                                                                             >  1:91694/1‑109 (MQ=255)

                                                          gcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTaaa                                                                                                                             <  2:91694/109‑1 (MQ=255)

                                                           cagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGt                                                                                                                                            <  2:3725963/93‑1 (MQ=255)

                                                           cagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGt                                                                                                                                            >  1:3725963/1‑93 (MQ=255)

                                                             gcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCgg                                                                                 >  1:152188/1‑150 (MQ=255)

                                                               ttGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATgg                                                                                                                                       >  2:3275135/1‑94 (MQ=255)

                                                               ttGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATgg                                                                                                                                       <  1:3275135/94‑1 (MQ=255)

                                                                 gACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCgg                                                                             <  1:1797568/150‑1 (MQ=255)

                                                                    cTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGAt                                                                          >  1:579764/1‑150 (MQ=255)

                                                                        aTCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATcgcg                                                                      >  1:3178252/1‑150 (MQ=255)

                                                                        aTCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATcgcg                                                                      >  1:3253141/1‑150 (MQ=255)

                                                                         tCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCgcgc                                                                     >  2:2415016/1‑150 (MQ=255)

                                                                            gCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCcac                                                                  >  2:1586466/1‑150 (MQ=255)

                                                                            gCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCcac                                                                  >  1:3730637/1‑150 (MQ=255)

                                                                                 ggCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTg                                                             >  2:3414258/1‑150 (MQ=255)

                                                                                  gCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        <  1:796745/106‑1 (MQ=255)

                                                                                  gCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGaa                                                                                                        >  2:796745/1‑106 (MQ=255)

                                                                                        cGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGGAACGCCCGGCAGGGCTGGTGATGGCCGCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCa                                                      <  2:2712761/150‑1 (MQ=255)

                                                                                         gCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCAc                                                     <  2:1681065/150‑1 (MQ=255)

                                                                                         gCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGG‑CCCGGTAAAGGCGCCCTTCTCGTGGCCGCACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACg                                                    >  2:729359/1‑150 (MQ=255)

                                                                                           cGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGa                                                   >  1:1304834/1‑150 (MQ=255)

                                                                                            gATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGaa                                                  <  2:3074725/150‑1 (MQ=255)

                                                                                                   tcgAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCg                                                         <  1:566331/136‑1 (MQ=255)

                                                                                                   tcgAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCg                                                         >  2:566331/1‑136 (MQ=255)

                                                                                                   tcgAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCt                                           >  1:2855185/1‑150 (MQ=255)

                                                                                                     gAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGtt                                                              >  1:778426/1‑129 (MQ=255)

                                                                                                     gAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGtt                                                              <  2:778426/129‑1 (MQ=255)

                                                                                                     gAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTc                                         >  1:2167802/1‑150 (MQ=255)

                                                                                                       ggAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTcgc                                       <  2:1304834/150‑1 (MQ=255)

                                                                                                       ggAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTcgc                                       >  1:3321275/1‑150 (MQ=255)

                                                                                                        gAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCa                                                      <  2:639732/134‑1 (MQ=255)

                                                                                                        gAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCa                                                      >  1:639732/1‑134 (MQ=255)

                                                                                                        gAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTcgcg                                      <  1:1586466/150‑1 (MQ=255)

                                                                                                           cAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCgcggcg                                   >  1:345048/1‑150 (MQ=255)

                                                                                                            aGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGgcgc                                  >  1:560555/1‑150 (MQ=255)

                                                                                                            aGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGgcgc                                  <  2:579764/150‑1 (MQ=255)

                                                                                                            aGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGgcgc                                  <  1:256492/150‑1 (MQ=255)

                                                                                                             gggTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCt                                 >  1:2678913/1‑150 (MQ=255)

                                                                                                                   cgccgTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAAt                           <  1:1303705/150‑1 (MQ=255)

                                                                                                                    gccgTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATg                          <  2:560555/150‑1 (MQ=255)

                                                                                                                     ccgTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATgg                         <  2:3178252/150‑1 (MQ=255)

                                                                                                                           gCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              >  2:3169095/1‑59 (MQ=255)

                                                                                                                           gCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTg                                                                                                              <  1:3169095/59‑1 (MQ=255)

                                                                                                                            ccAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCgcgc                                                                     >  2:2758007/1‑99 (MQ=255)

                                                                                                                             cAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAg                 <  2:2176095/150‑1 (MQ=255)

                                                                                                                             cAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAg                 <  1:1339498/150‑1 (MQ=255)

                                                                                                                              aGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAgg                <  2:2470098/150‑1 (MQ=255)

                                                                                                                                ttCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCg                                                                                                                >  2:675986/1‑52 (MQ=255)

                                                                                                                                   gAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCg                                                                                  <  1:2910797/79‑1 (MQ=255)

                                                                                                                                   gAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCg                                                                                  >  2:2910797/1‑79 (MQ=255)

                                                                                                                                        gCCCGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTa      >  1:2040771/1‑150 (MQ=255)

                                                                                                                                         cccGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTAc     <  2:1497025/150‑1 (MQ=255)

                                                                                                                                          ccGGCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTAcc    <  2:2897823/150‑1 (MQ=255)

                                                                                                                                            ggCAGGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCTCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTACCAc  <  2:2167802/150‑1 (MQ=255)

ATGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCACGGCTGGTGATGGCCCCGGTAAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTACCAC  >  NC_002947/4964570‑4964859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`