BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	5,656,409	C→T	R446H (CGC→CAC)	tktA ←	transketolase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,656,409	0	C	T	100.0%	570.7 / NA	172	R446H (CGC→CAC)	tktA	transketolase A
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (99/73); total (99/73)

Only 100 of 172 total aligned reads displayed.

CGGCCGGGCGCCAGGTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATT  >  NC_002947/5656263‑5656554

cGGCCGGGCGCCAGCTGTCCAGGTTCGGGGTGCTGCGCAGGCTTGTCAGCTGCTCGAGCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCa                                                                                                                                                <  1:179763/150‑1 (MQ=255)

  gCCGGGCGCCAGGTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACg                                                                                                                                              >  1:1664519/1‑150 (MQ=255)

  gCCGGGCGCCAGGTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACg                                                                                                                                              >  2:1141247/1‑150 (MQ=255)

          ccAGGTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCg                                                                                                                                      >  2:483168/1‑150 (MQ=255)

            atgtgtCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCggg                                                                                                                                    >  2:221858/3‑150 (MQ=255)

             ggTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGc                                                                                                                                   <  2:2234920/150‑1 (MQ=255)

                 tCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTAt                                                                                                                               >  1:2220152/1‑150 (MQ=255)

                     ggTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGCACGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACAGGTGCACGGCGTTGCGGGCGTATTCCa                                                                                                                           <  1:1457014/150‑1 (MQ=255)

                      gTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCAt                                                                                                                          <  2:2071978/150‑1 (MQ=255)

                         cGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGaa                                                                                                                       <  2:3687212/150‑1 (MQ=255)

                             gTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATc                                                                                                                   <  1:846362/150‑1 (MQ=255)

                             gTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATc                                                                                                                   >  2:3417005/1‑150 (MQ=255)

                             gTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGGTGCGGGCGTATTCCATGAACATc                                                                                                                   >  1:384268/1‑150 (MQ=255)

                                 tgcGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGa                                                                                                               <  2:291244/150‑1 (MQ=255)

                                   cgcAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAg                                                                                                             <  1:629677/150‑1 (MQ=255)

                                             tCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGCTCCCGCGCTGCTTCATCAGGGAAGACCTGTACCCGGCACTGCGGGCGTATTCCATGAACATCAGCAACGTGGCCCCgc                                                                                                   >  2:1178241/1‑149 (MQ=255)

                                               aGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTaa                                                                                                 <  1:3417005/150‑1 (MQ=255)

                                                 ctgctCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAgg                                                                                               >  1:980962/1‑150 (MQ=255)

                                                            gCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCAc                                                                                    >  2:3606658/1‑150 (MQ=255)

                                                              tGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTc                                                                                                          <  1:3617109/126‑1 (MQ=255)

                                                                   cGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAg                                                                             <  1:1141247/150‑1 (MQ=255)

                                                                    gTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAgg                                                                            <  1:221858/150‑1 (MQ=255)

                                                                     tCGGTCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATAAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAggg                                                                           >  1:1369582/1‑150 (MQ=255)

                                                                     tCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACCACTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAggg                                                                           <  2:1434681/150‑1 (MQ=255)

                                                                     ggaggCCGTCTTCGCCGAGACCGATGGAGTCGTGGGCGTACCCGCGCAGCACGCGGTGCTTCATCAGGGCCGACATGTGCACGGCCCTGCGGGCGTAGGCCATCAACAGCAGGAGGGTCGCGCCCGACGGCATCAGCCCACCGTGCAggg                                                                           <  2:1434842/147‑1 (MQ=255)

                                                                        ggCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGa                                                                                                                        >  2:411345/1‑102 (MQ=255)

                                                                        ggCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGa                                                                                                                        <  1:411345/102‑1 (MQ=255)

                                                                             tCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCgg                                                                                                                                     >  2:1601695/1‑84 (MQ=255)

                                                                             tCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGCAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCg                                                                   >  2:2716356/1‑150 (MQ=255)

                                                                              cTTCGCCCAGACCGATGGAGTCGTGGGTGTCCACGTGGATCACGAGCTGCTTGATCAGGGCCGAAATGTGCAAGGCGTTGCGGGCGTATTCCATCAACAAAAGGAAGGTCGCGCCGTCAGGCACCACGCCACCGGCCAGGGCAACGCCgg                                                                  >  2:1225830/1‑149 (MQ=255)

                                                                              cTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGt                                                                  <  1:260056/150‑1 (MQ=255)

                                                                               ttCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGc                                                                                                                                   >  1:3641806/1‑84 (MQ=255)

                                                                               ttCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGc                                                                                                                                   <  2:3641806/84‑1 (MQ=255)

                                                                               ttCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGtt                                                                 >  1:167751/1‑150 (MQ=255)

                                                                                   cccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCAt                                                                                                                          >  2:113134/1‑89 (MQ=255)

                                                                                   cccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAg                                                                                                <  1:2404090/115‑1 (MQ=255)

                                                                                   cccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAg                                                                                                >  2:2404090/1‑115 (MQ=255)

                                                                                    ccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGt                                                                                 <  1:2787383/129‑1 (MQ=255)

                                                                                    ccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatga                                                            >  2:1509432/1‑150 (MQ=255)

                                                                                    ccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatga                                                            <  1:2913806/150‑1 (MQ=255)

                                                                                    ccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatga                                                            >  1:2154776/1‑150 (MQ=255)

                                                                                    ccAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatga                                                            >  2:2913806/1‑150 (MQ=255)

                                                                                      aGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatgatg                                                          >  1:158197/1‑150 (MQ=255)

                                                                                         ccGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCg                                                       <  2:656373/150‑1 (MQ=255)

                                                                                         ccGATGGAGTCGTGGGTCTACACCTGGATCAGGCGCTACTTCATCAGGGCAGACCAGTGCACGGAGTTGTGGGCGTATACCATGACCATCACTAAGGTCGCTCCGGAAGGCACCAGGTCACCGTGCAGGGCCACGCCGTTCATGATGGCg                                                       <  2:1369582/150‑1 (MQ=255)

                                                                                          cGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATc                                                                                                                   <  1:209004/89‑1 (MQ=255)

                                                                                            aTGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTc                                                    >  2:3766115/1‑150 (MQ=255)

                                                                                                aGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGc                                                <  2:1716243/150‑1 (MQ=255)

                                                                                                    gTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCa                                                                                          >  1:3675268/1‑104 (MQ=255)

                                                                                                    gTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCa                                                                                          <  2:3675268/104‑1 (MQ=255)

                                                                                                        gtgtACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCatgatg                                                          <  2:3402776/132‑1 (MQ=255)

                                                                                                        gtgtACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTc                                         >  2:1037313/1‑149 (MQ=255)

                                                                                                        gtgtACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTc                                         <  1:1037313/149‑1 (MQ=255)

                                                                                                        gtggACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTcg                                        >  2:631683/1‑150 (MQ=255)

                                                                                                          gtACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTcgcg                                      >  1:2258881/1‑150 (MQ=255)

                                                                                                           tACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGATGCGAAACAATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCgcgc                                     >  2:1853983/1‑150 (MQ=255)

                                                                                                            acacGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCa                                    >  2:2631105/1‑150 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGGCAGGTGCACGGCGTGGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACg                                  >  1:3492417/1‑150 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGCCATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAgg                                                                            <  1:3074268/108‑1 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAgg                                                                            >  2:3074268/1‑108 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCat                                                              <  1:2358480/122‑1 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGcc                                               >  1:2336941/1‑137 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGcc                                               <  2:2336941/137‑1 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACg                                  >  2:842901/1‑150 (MQ=255)

                                                                                                              acGTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACg                                  >  2:2283975/1‑150 (MQ=255)

                                                                                                              acGTGGATCACGCGATGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCa                                                               <  2:1400056/121‑1 (MQ=255)

                                                                                                              acGTGGATCACGCGATGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCa                                                               >  1:1400056/1‑121 (MQ=255)

                                                                                                                gTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAg                                                                                         >  2:2579680/1‑93 (MQ=255)

                                                                                                                gTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGcc                                >  1:1557078/1‑150 (MQ=255)

                                                                                                                gTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGcc                                >  1:1907175/1‑150 (MQ=255)

                                                                                                                gTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGcc                                >  2:2787055/1‑150 (MQ=255)

                                                                                                                gTGGATCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGcc                                >  2:2087912/1‑150 (MQ=255)

                                                                                                                    aTCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGaa                                                                                                              <  2:1772148/68‑1 (MQ=255)

                                                                                                                     tCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCa                                                               >  1:1165632/1‑114 (MQ=255)

                                                                                                                     tCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGa                           >  1:2567230/1‑150 (MQ=255)

                                                                                                                     tCACGCGCTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGa                           >  1:2568751/1‑150 (MQ=255)

                                                                                                                      cACGCGCTGCTTCATCAGGGCCGACATGTGCACGACGTGGCGGGCGTATTCCATGAACATCAGGAAGGACGCGCCGTCAACCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGaa                          >  1:3091562/1‑150 (MQ=255)

                                                                                                                          cgcTGCTTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACg                      <  1:1509432/150‑1 (MQ=255)

                                                                                                                           gctgctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCat                                                              >  1:761199/1‑109 (MQ=255)

                                                                                                                           gctgctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCat                                                              <  2:761199/109‑1 (MQ=255)

                                                                                                                            ctgctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTa                    <  1:1298678/150‑1 (MQ=255)

                                                                                                                             tgctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACCGCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAg                   >  1:3095131/1‑150 (MQ=255)

                                                                                                                             tgctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAg                   <  1:3556189/150‑1 (MQ=255)

                                                                                                                               ctTCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGtt                 <  1:483168/150‑1 (MQ=255)

                                                                                                                                ttCATCAGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGG‑CACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGc               >  1:1185170/1‑150 (MQ=255)

                                                                                                                                 tcatcaGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGc               <  2:434651/150‑1 (MQ=255)

                                                                                                                                   atcaGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCg             >  2:2744538/1‑150 (MQ=255)

                                                                                                                                      aGGGCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTg          >  1:1265413/1‑150 (MQ=255)

                                                                                                                                       gggCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTcg                                        >  2:2141534/1‑119 (MQ=255)

                                                                                                                                       gggCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTcg                                        <  1:2141534/119‑1 (MQ=255)

                                                                                                                                         gCCGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTa                             >  1:1121760/1‑128 (MQ=255)

                                                                                                                                          ccGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGt      >  1:3252348/1‑150 (MQ=255)

                                                                                                                                           cGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGtt                                                                 >  1:989750/1‑90 (MQ=255)

                                                                                                                                           cGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGtt                                                                 <  2:989750/90‑1 (MQ=255)

                                                                                                                                           cGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTgg         <  2:1415759/146‑1 (MQ=255)

                                                                                                                                           cGACATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTc     >  1:2941833/1‑150 (MQ=255)

                                                                                                                                             aCATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGCAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAt   <  2:2568751/150‑1 (MQ=255)

                                                                                                                                             aCATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAt   <  2:2567230/150‑1 (MQ=255)

                                                                                                                                             aCATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAt   >  1:2349873/1‑150 (MQ=255)

                                                                                                                                              cATGTGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAtt  <  1:1414193/150‑1 (MQ=255)

CGGCCGGGCGCCAGGTGTCCAGGTTCGGGGTGCTGCGCAGGCTGGTCAGCTGCTCGATCGGCTGGTGCGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTACACGTGGATCACGCGCTGCTTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATT  >  NC_002947/5656263‑5656554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`