New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	358055 =	53 (0.770)	14 (0.270)	11/196	4.3	31.2%	intergenic (+20/‑110)	tdcG‑I/PP_5441	L‑serine dehydratase/hypothetical protein
	?	NC_002947	358133 =	22 (0.430)					intergenic (+98/‑32)	tdcG‑I/PP_5441	L‑serine dehydratase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358228‑358055 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281                                                                                                                                                                                                                                                                                                                                     ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGA                                                                                                                                                                               <  2:941444/150‑1      GATCGCGACATCCGACGATCGGTAGGCCGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          <  1:13275/150‑1        TCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCa                                                                                                                                                                        >  2:950888/1‑149         CGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTT                                                                                                                                                                       <  1:1106875/150‑1                 CCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCAAGCCCGCtc                                                                                                                                                               <  1:950888/150‑3                              GGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGG                                                                                                                                                                           <  1:1512638/125‑1                              GGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGG                                                                                                                                                                           >  2:1512638/1‑125                                                    CATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGG                                                                                                                                                          <  2:442838/120‑1                                                    CATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGG                                                                                                                                                          >  1:442838/1‑120                                                                 AGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          >  2:930799/1‑91                                                                 AGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          <  1:930799/91‑1                                                                                                    CCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCC                                                                                                                                                        >  2:66787/1‑74                                                                                                    CCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCC                                                                                                                                                        <  1:66787/74‑1                                                                                                              GGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTC                                                                  >  1:608011/1‑150                                                                                                                      CGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAG                                                          <  2:608011/150‑1                                                                                                                       GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGT                                                         >  2:1106472/1‑150                                                                                                                       GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      >  1:1331985/1‑105                                                                                                                       GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      <  2:1331985/105‑1                                                                                                                           CTACAGGGATTGCACCGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGTTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCTACCCGCCTACCGATCGTTGGATGTCGAGTCCAGTGTGG                                                     >  2:338931/1‑150                                                                                                                           CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGT                                                                                                        >  1:1046979/1‑99                                                                                                                           CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGT                                                                                                        <  2:1046979/99‑1                                                                                                                           CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAG                                                                                                                                        <  2:340991/67‑1                                                                                                                           CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAG                                                                                                                                        >  1:340991/1‑67                                                                                                                             ACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGG                                                                                                         <  2:1086450/96‑1                                                                                                                             ACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGG                                                                                                         >  1:1086450/1‑96                                                                                                                               AGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGT                                                 >  2:1256/1‑150                                                                                                                                        ACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGA                                        <  1:1106472/150‑1                                                                                                                                              CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGC                                                   >  2:1504628/1‑133                                                                                                                                              CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGC                                                   <  1:1504628/133‑1                                                                                                                                              CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGG                                                                                                    >  2:401204/1‑84                                                                                                                                              CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGG                                                                                                    <  1:401204/84‑1                                                                                                                                                TGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAA                                <  1:1334914/150‑1                                                                                                                                                       GCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGAAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGAGTTGTCGGTGACACTTAAAGGTGTCG                         >  1:131164/1‑150                                                                                                                                                        CGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGC                        <  1:941444/150‑1                                                                                                                                                           GCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTC                     <  1:1414453/150‑1                                                                                                                                                             TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTA                                                                                  >  2:1075325/1‑87                                                                                                                                                             TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTA                                                                                  <  1:1075325/87‑1                                                                                                                                                                 CCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  <  1:789981/147‑1                                                                                                                                                                 CCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  >  2:789981/1‑147                                                                                                                                                                  CGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGC                                                                                     >  1:1386468/1‑79                                                                                                                                                                  CGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGC                                                                                     <  2:1386468/79‑1                                                                                                                                                                   GCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGAGTTGGCGGTGACACTTAAAGGTGTCGCTTCTGGGAAAC             <  1:578336/150‑1                                                                                                                                                                           GCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGG     >  2:770960/1‑150                                                                                                                                                                             CCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCG   >  2:767098/1‑150                                                                                                                                                                              CTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  2:1666859/1‑150                                                                                                                                                                                                                                                                                                                                     ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358228‑358055 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.