New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 358055 =53 (0.770)14 (0.270) 11/196 4.3 31.2% intergenic (+20/‑110) tdcG‑I/PP_5441 L‑serine dehydratase/hypothetical protein
?NC_002947 358133 = 22 (0.430)intergenic (+98/‑32) tdcG‑I/PP_5441 L‑serine dehydratase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358228‑358055
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281
                                                                                                                                                                                                                                                                                                                                   
ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGA                                                                                                                                                                               <  2:941444/150‑1
     GATCGCGACATCCGACGATCGGTAGGCCGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          <  1:13275/150‑1
       TCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCa                                                                                                                                                                        >  2:950888/1‑149
        CGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTT                                                                                                                                                                       <  1:1106875/150‑1
                CCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCAAGCCCGCtc                                                                                                                                                               <  1:950888/150‑3
                             GGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGG                                                                                                                                                                           <  1:1512638/125‑1
                             GGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGG                                                                                                                                                                           >  2:1512638/1‑125
                                                   CATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGG                                                                                                                                                          <  2:442838/120‑1
                                                   CATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGG                                                                                                                                                          >  1:442838/1‑120
                                                                AGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          >  2:930799/1‑91
                                                                AGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          <  1:930799/91‑1
                                                                                                   CCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCC                                                                                                                                                        >  2:66787/1‑74
                                                                                                   CCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCC                                                                                                                                                        <  1:66787/74‑1
                                                                                                             GGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTC                                                                  >  1:608011/1‑150
                                                                                                                     CGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAG                                                          <  2:608011/150‑1
                                                                                                                      GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGT                                                         >  2:1106472/1‑150
                                                                                                                      GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      >  1:1331985/1‑105
                                                                                                                      GCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      <  2:1331985/105‑1
                                                                                                                          CTACAGGGATTGCACCGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGTTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCTACCCGCCTACCGATCGTTGGATGTCGAGTCCAGTGTGG                                                     >  2:338931/1‑150
                                                                                                                          CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGT                                                                                                        >  1:1046979/1‑99
                                                                                                                          CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGT                                                                                                        <  2:1046979/99‑1
                                                                                                                          CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAG                                                                                                                                        <  2:340991/67‑1
                                                                                                                          CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAG                                                                                                                                        >  1:340991/1‑67
                                                                                                                            ACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGG                                                                                                         <  2:1086450/96‑1
                                                                                                                            ACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGG                                                                                                         >  1:1086450/1‑96
                                                                                                                              AGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGT                                                 >  2:1256/1‑150
                                                                                                                                       ACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGA                                        <  1:1106472/150‑1
                                                                                                                                             CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGC                                                   >  2:1504628/1‑133
                                                                                                                                             CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGC                                                   <  1:1504628/133‑1
                                                                                                                                             CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGG                                                                                                    >  2:401204/1‑84
                                                                                                                                             CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGG                                                                                                    <  1:401204/84‑1
                                                                                                                                               TGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAA                                <  1:1334914/150‑1
                                                                                                                                                      GCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGAAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGAGTTGTCGGTGACACTTAAAGGTGTCG                         >  1:131164/1‑150
                                                                                                                                                       CGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGC                        <  1:941444/150‑1
                                                                                                                                                          GCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTC                     <  1:1414453/150‑1
                                                                                                                                                            TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTA                                                                                  >  2:1075325/1‑87
                                                                                                                                                            TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTA                                                                                  <  1:1075325/87‑1
                                                                                                                                                                CCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  <  1:789981/147‑1
                                                                                                                                                                CCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  >  2:789981/1‑147
                                                                                                                                                                 CGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGC                                                                                     >  1:1386468/1‑79
                                                                                                                                                                 CGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGC                                                                                     <  2:1386468/79‑1
                                                                                                                                                                  GCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGAGTTGGCGGTGACACTTAAAGGTGTCGCTTCTGGGAAAC             <  1:578336/150‑1
                                                                                                                                                                          GCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGG     >  2:770960/1‑150
                                                                                                                                                                            CCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCG   >  2:767098/1‑150
                                                                                                                                                                             CTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  2:1666859/1‑150
                                                                                                                                                                                                                                                                                                                                   
ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358228‑358055
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.