| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2047296 = | 11 (0.570) | 4 (0.220) | 4/248 | NT | 27.1% | coding (768/1197 nt) | PP_1820 | benzoate transport protein |
| ? | NC_002947 | 2047345 = | 11 (0.590) | coding (719/1197 nt) | PP_1820 | benzoate transport protein | |||||
ACATGCCCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2047351‑2047296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGA > NC_002947/2047345‑2047412 ACATGCCCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGA < 1:286668/124‑1ACATGCCCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGA > 2:286668/1‑124 GCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGGGCATGTTCTGCGA < 1:431437/56‑1 GCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGGGCATGTTCTGCGA > 2:431437/1‑56 ACATGCCCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2047351‑2047296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGA > NC_002947/2047345‑2047412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |