| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6022690 | 19 (0.980) | 4 (0.220) | 4/246 | NT | 16.3% | coding (842/1293 nt) | PP_5273 | oxidoreductase |
| ? | NC_002947 | = 6022719 | 23 (1.250) | coding (871/1293 nt) | PP_5273 | oxidoreductase | |||||
GCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6022539‑6022690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGT < NC_002947/6022719‑6022573 GCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCG < 1:52386/150‑1GCCAAGACCCTGGTACTGTGCTGCAACGCCTACCAAAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCG < 1:169419/150‑1 AACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGC < 1:428694/150‑1 AACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGC > 2:428694/1‑150 CTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATA < 1:457666/148‑1 CTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATA > 2:457666/1‑148 GGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACGTTGCTGCCGCAGAATATGGCG > 1:381639/1‑85 GGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACGTTGCTGCCGCAGAATATGGCG < 2:381639/85‑1 GGTAGTAGGCACGCGCCACGCGTTGTTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTCGCGATGATGTAGCTGTCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGT < 2:79389/150‑1 GCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6022539‑6022690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGT < NC_002947/6022719‑6022573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |