New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2050638	11 (0.570)	4 (0.290)	4/184	NT	32.2%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	9 (0.660)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein

GGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCG  >  NC_002947/2050493‑2050784                                                                                                                                                  |                                                                                                                                                   ggATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACgggg                                                                                                                                                >  2:189819/1‑150 (MQ=255)       gCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTca                                                                                                                                          >  1:77689/1‑150 (MQ=255)       gCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGACACCTTGCATGATGCCTCCACGTAGGCGGACTACTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTca                                                                                                                                          <  1:478207/150‑1 (MQ=39)              gccgcGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGcc                                                                                                                                   >  1:368401/1‑150 (MQ=255)                   gcACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAg                                                                                                                              <  2:77689/150‑1 (MQ=255)                         cGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGAcggcg                                                                                                                        <  1:189819/150‑1 (MQ=255)                            ccTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCgggg                                                                                                                     >  2:423850/1‑150 (MQ=255)                                     gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtag                                                                                                            <  2:278617‑M1/150‑41 (MQ=255)                                            aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcggg                                                                                                     >  1:423850‑M2/1‑139 (MQ=255)                                                     ttGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTTTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACg                                                                                                                                                   >  1:12601/1‑95 (MQ=255)                                                     ttGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACg                                                                                                                                                   <  2:12601/95‑1 (MQ=255)                                                     ttGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggtccacccgc                                                                                            >  2:368401‑M2/1‑130 (MQ=255)                                                       gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggccatcttccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcga                                                                                          >  1:476102‑M1/1‑92 (MQ=255)                                                          tgaggCCGCCACGTAGCCGGGGAAGTTTGCGTGACTCGGGGTCGGTGTCCAGACTGTGCTGGCCTCTGCGCGGGTGAACCCGCGCCTACGGGGAGGTCACAGAGCGCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCCGCCGCGAaga                                                                                       <  2:178390/150‑1 (MQ=255)                                                                                   tttACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                      >  1:240678‑M1/1‑64 (MQ=255)                                                                                   tttACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg                                                                                                      <  2:240678‑M1/110‑47 (MQ=255)                                                                                                         tgCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGt                                                      <  1:303053/136‑1 (MQ=255)                                                                                                         tgCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGt                                                      >  2:303053/1‑136 (MQ=255)                                                                                                                          tctTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcggg                                                                                                     >  1:167829‑M1/1‑25 (MQ=255)                                                                                                                          tctTCGCGGGTGAACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcggg                                                                                                     <  2:167829‑M1/72‑48 (MQ=255)                                                                                                                             tCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGAAGATGGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgc                    >  1:476102‑M2/1‑58 (MQ=255)                                                                                                                               gcgGGTGGACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaa                  >  2:368401‑M1/1‑20 (MQ=255)                                                                                                                               gcgGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTccc                  >  1:403197/1‑150 (MQ=255)                                                                                                                                        cccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgat         >  1:423850‑M1/1‑11 (MQ=255)                                                                                                                                        cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaaga                                                                                       <  2:167829‑M2/72‑26 (MQ=255)                                                                                                                                        cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaaga                                                                                       >  1:167829‑M2/1‑47 (MQ=255)                                                                                                                                         ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaa                                                <  2:240678‑M2/110‑65 (MQ=255)                                                                                                                                         ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaa                                                >  1:240678‑M2/1‑46 (MQ=255)                                                                                                                                         ccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg        >  2:220387/1‑150 (MQ=255)                                                                                                                                               cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccc  <  2:278617‑M2/150‑111 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCG  >  NC_002947/2050493‑2050784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.