New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	836205 =	22 (1.140)	9 (0.510)	6/236	NT	35.9%	intergenic (‑124/+53)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
	?	NC_002947	836237 =	12 (0.680)					intergenic (‑156/+21)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase

CTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGCCAC  >  NC_002947/836090‑836386                                                                                                                                                    |                                                                                                                                                      ctctGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtg                                                                                                                                                     >  1:68398/1‑150 (MQ=255)  tctGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt                                                                                                                                                    >  1:122402/1‑150 (MQ=255)    tGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt                                                                                                                                                    >  2:416106/1‑148 (MQ=255)    tGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt                                                                                                                                                    <  1:416106/148‑1 (MQ=255)          caaggaagccggtaagtggcgtctggaaggcaaagactacatcgtcaaagacggcgacgtgatgcacttccgctttaacgtctaagcggtaacctgcagcacacacaaaccccttgaagcgcaagcctcaaggggtttGTGTGTGCTGCa                                                                                                                                            <  2:27077‑M2/12‑1 (MQ=255)          agaAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCAGCCTGGCACCGCGCAAGACCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCa                                                                                                                                            <  1:182392/150‑1 (MQ=255)                   cTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGc                                                                                                                                   <  2:122402/150‑1 (MQ=255)                    tGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCt                                                                                                                                  >  1:307247/1‑150 (MQ=255)                         cTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGAc                                                                                                                             >  1:77632/1‑150 (MQ=255)                           cAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt                                                                                                                           <  2:121389/150‑1 (MQ=255)                              cTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGtt                                                                                                                          >  2:110612/1‑148 (MQ=255)                              cTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGtt                                                                                                                          <  1:110612/148‑1 (MQ=255)                                   aTGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCga                                                                                                                   <  2:77632/150‑2 (MQ=255)                                                                         gCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCttt                                                                             >  1:76991/1‑150 (MQ=255)                                                                         gCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGC‑GGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTg                                                                            >  1:368904/1‑150 (MQ=255)                                                                                                        tgcagcacacacAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTg                                              <  2:27077‑M1/138‑1 (MQ=255)                                                                                                           ggCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt                                                                                                                           >  1:303761/1‑70 (MQ=255)                                                                                                           ggCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt                                                                                                                           <  2:303761/70‑1 (MQ=255)                                                                                                                      accccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCAcc                                >  1:451374‑M2/31‑150 (MQ=255)                                                                                                                       CCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGTCGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCAccc                               >  2:307247‑M1/1‑150 (MQ=255)                                                                                                                         ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa                                                                                                                       <  2:261391‑M2/33‑1 (MQ=255)                                                                                                                         ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa                                                                                                                       >  1:261391‑M2/28‑60 (MQ=255)                                                                                                                         ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa                                                                                                                       <  2:384255‑M2/33‑1 (MQ=255)                                                                                                                         ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa                                                                                                                       >  1:384255‑M2/28‑60 (MQ=255)                                                                                                                          cttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTg                            >  1:189335‑M2/27‑150 (MQ=255)                                                                                                                            TGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGaa                          >  2:334184‑M1/1‑150 (MQ=255)                                                                                                                                 cttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGa                     <  1:27077‑M2/131‑1 (MQ=255)                                                                                                                                 cttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGa                     <  2:451374‑M2/131‑1 (MQ=255)                                                                                                                                                    gtgtgtgCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGccac  <  2:189335/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGCCAC  >  NC_002947/836090‑836386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.