New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3387807 =	10 (0.520)	3 (0.170)	3/242	NT	23.6%	coding (545/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	3387849 =	10 (0.550)					coding (587/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase

GAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGTTGCCGAG  >  NC_002947/3387701‑3387961                                                                                                                                                     |                                                                                                                 acatgaagtggcgggatggttaccaactcgcgacggtcgaaacggaccagtgcagcatcgaccagctcaccgacctccatcacctccgggagtgttttgacgtcaaTGACGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCAtt                                                                                                                 >  2:60943‑M1/107‑150 (MQ=255)    ttCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAACGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGAc                                                                                                              >  1:61095/1‑150 (MQ=255)                                          gCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGAGATGGAGGTCGGTGAGCt                                                                        >  1:69200/1‑150 (MQ=255)                                              tttCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCGCGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTc                                                                    >  1:30260/1‑150 (MQ=255)                                                                           gTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTcg                                       >  1:162369/1‑150 (MQ=255)                                                                              aCCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGa                                    >  2:283166/1‑150 (MQ=255)                                                                                ccAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAACGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGt                                  <  2:61095/150‑1 (MQ=255)                                                                                  aaGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTg                                <  1:171958/150‑1 (MQ=255)                                                                                               tGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGc                   >  1:16092/1‑150 (MQ=255)                                                                                                    gCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACtt              <  2:16092/150‑1 (MQ=255)                                                                                                         aatgccggcacgcgcccagatctcggtgcgggtcgctgccgtcaTTGACGTCAAAACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTGGTCCGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGt         >  2:60943‑M2/45‑150 (MQ=255)                                                                                                           tgccggcacgcgcccagatctcggtgcgggtcgctgccggcaTTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGa                                                                           <  1:349435‑M2/40‑1 (MQ=255)                                                                                                           tgccggcacgcgcccagatctcggtgcgggtcgctgccggcaTTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGa                                                                           >  2:349435‑M2/43‑82 (MQ=255)                                                                                                           TGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGTTg       <  1:417418‑M1/150‑1 (MQ=255)                                                                                                             CCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGa                                    <  1:430895‑M1/119‑1 (MQ=255)                                                                                                             CCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGa                                    >  2:430895‑M1/1‑119 (MQ=255)                                                                                                                GCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGTTGCCGAg  <  1:428499‑M1/150‑1 (MQ=255)                                                                                                                         cGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGt                                                                                 <  1:362713/62‑1 (MQ=255)                                                                                                                         cGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGt                                                                                 >  2:362713/1‑62 (MQ=255)                                                                                                                                                     |                                                                                                                 GAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCAGCGACCCGCACCGAGATCTGGGCGCGTGCCGGCATTGACGTCAACACACTCCCGGAGGTGATGGAGGTCGGTGAGCTGGTCGATGCTGCACTTGTCGGTTTCGACCGTCGCGAGTTGGTAACCATCCCGCCACTTCATGTTGCCGAG  >  NC_002947/3387701‑3387961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.