New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 652785	38 (0.910)	21 (0.590)	18/230	1.1	56.5%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

CATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGAATCTCGCTCA  >  NC_002947/652646‑652929                                                                                                                                             |                                                                                                                                                 cATGAAAAACAGGCGGCGCATGGGGGGCTCGCAAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGaa                                                                                                                                        <  1:775225/150‑1 (MQ=255)      aaaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGGAGGAGCGGGTTTACCTGCGAAGCGCCGCGCGTGAGGCGCGCGATCATCA‑ACCCTGAACGcgg                                                                                                                                   >  2:463414/1‑148 (MQ=255)                      ggCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TC                                                                                                                                                  <  2:70431‑M1/119‑1 (MQ=255)                      ggCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TC                                                                                                                                                  >  1:70431‑M1/1‑119 (MQ=255)                             tCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCg                                                                                                            >  1:284713/1‑150 (MQ=255)                                    gTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGc                                                                                                     <  1:967144/150‑1 (MQ=255)                                       gAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTca                                                                                                  >  2:79833/1‑150 (MQ=255)                                           gTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCAc                                                                                                              >  2:747864/1‑134 (MQ=255)                                           gTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCAc                                                                                                              <  1:747864/134‑1 (MQ=255)                                                      gATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCt                                                                                   >  1:162121/1‑150 (MQ=255)                                                           aaatcccgcaggaatAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccag                                                                              >  2:44179‑M1/7‑82 (MQ=255)                                                                  gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctga                                                                       >  2:756052‑M1/1‑75 (MQ=255)                                                                  gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTc                                                                                                                                   <  1:510348/90‑1 (MQ=255)                                                                  gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTc                                                                                                                                   >  2:510348/1‑90 (MQ=255)                                                                  gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAgg                                                                                                      <  2:418665/119‑1 (MQ=255)                                                                  gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAgg                                                                                                      >  1:418665/1‑119 (MQ=255)                                                                   cAGGAATGATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCATACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTc                                                                      <  1:463414/150‑1 (MQ=255)                                                                      gAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaac                                                                   >  2:37205‑M1/1‑71 (MQ=255)                                                                         taatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctc                                                                >  1:941169‑M1/1‑68 (MQ=255)                                                                            ttGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacccctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccg                                                             <  1:78451‑M1/150‑86 (MQ=255)                                                                            ttGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgcg                                                             >  1:872728/1‑150 (MQ=255)                                                                            ttGGCCCGAAACAAACGTAGGAGCGGGGTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgcg                                                             <  1:389939/150‑1 (MQ=255)                                                                                 ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaa                                                        >  1:939770‑M1/1‑60 (MQ=255)                                                                                 ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaa                                                                                                     <  1:84246‑M1/105‑46 (MQ=255)                                                                                 ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaa                                                                                                     >  2:84246‑M1/1‑60 (MQ=255)                                                                                 ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCa                                                        >  1:800150/1‑150 (MQ=255)                                                                                 ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGAGCCGAGAGGGGGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCa                                                        >  2:550288/1‑150 (MQ=255)                                                                                      acaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacct                                                   <  2:939770‑M1/150‑96 (MQ=255)                                                                                          acGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaa                                                                    >  2:972093‑M1/1‑51 (MQ=255)                                                                                          acGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaa                                                                    <  1:972093‑M1/129‑79 (MQ=255)                                                                                             tAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCAc                                            >  2:421284/1‑150 (MQ=255)                                                                                                gAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaa                                         >  1:928120‑M1/1‑45 (MQ=255)                                                                                                gAGCGGGTTTACCCGAGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCACTGCGCTGCAgg                                                      >  1:285576/1‑137 (MQ=255)                                                                                                gAGCGGGTTTACCCGAGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAgg                                                      <  2:285576/137‑1 (MQ=255)                                                                                                  gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGt                                       >  1:731467/1‑150 (MQ=255)                                                                                                  gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGt                                       >  2:366098/1‑150 (MQ=255)                                                                                                            ccGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATcc                             >  2:796820/1‑150 (MQ=255)                                                                                                             cgcgAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCGCACCGCCAAGGCTCAGCAGCTGTTCACCGTGTTTACGAACCTCGCCAATGCGCTGCAGGTTGTCTTTAGCAAGTTGGTGAATcgg                            >  1:398168/1‑148 (MQ=255)                                                                                                              gcgAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatc                                                                                                  <  2:619910‑M1/79‑49 (MQ=255)                                                                                                              gcgAAGCGCCGCGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatc                                                                                                  >  1:619910‑M1/1‑31 (MQ=255)                                                                                                                gAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTGAGCTCACCGCCCCGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGGTGTCTTCACCGAGTTCGTGAATCcgctc                         >  1:29038/1‑150 (MQ=255)                                                                                                                    cgccgcGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatccc                                                                                                <  2:853401‑M1/75‑51 (MQ=255)                                                                                                                    cgccgcGCGGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatccc                                                                                                >  1:853401‑M1/1‑25 (MQ=255)                                                                                                                      ccgcGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCt                                                >  1:971122/1‑121 (MQ=255)                                                                                                                      ccgcGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCt                                                <  2:971122/121‑1 (MQ=255)                                                                                                                      ccgcGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCtgtg                   >  2:977679/1‑150 (MQ=255)                                                                                                                      ccgcGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCtgtg                   <  1:366098/150‑1 (MQ=255)                                                                                                                       cgcgcgGGCGGCGCTCGATG‑GCctaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccct                  <  1:53248‑M1/150‑129 (MQ=255)                                                                                                                       cgcgcgGGCGGCGCTCGATC‑TGccaggcgaagaagctctcccggcgaacacctcccacgcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccct                  <  2:1008462‑M1/150‑129 (MQ=255)                                                                                                                       cgcgcgGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgc                                                              >  2:183709/1‑106 (MQ=255)                                                                                                                       cgcgcgGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgc                                                              <  1:183709/106‑1 (MQ=255)                                                                                                                        gcgcgGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgcccta                 <  1:756052‑M1/150‑130 (MQ=255)                                                                                                                        gcgcgGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctaccc                                               <  2:305141‑M1/120‑100 (MQ=255)                                                                                                                        gcgcgGGCGGCGCTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctaccc                                               >  1:305141‑M1/1‑21 (MQ=255)                                                                                                                         cgcgGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTg                                                          >  2:715124/1‑108 (MQ=255)                                                                                                                         cgcgGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTg                                                          <  1:715124/108‑1 (MQ=255)                                                                                                                          gcgggcggCGCTCGAGC‑CCccaggcgctgaaactctcccggcgaacacctcccagccgctgaaaatccccccgcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccctata               <  1:443867‑M1/150‑132 (MQ=255)                                                                                                                           cgggcggCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCAc              <  2:969691/150‑1 (MQ=255)                                                                                                                             ggcggcGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgct                          <  2:490698/136‑1 (MQ=255)                                                                                                                             ggcggcGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgct                          >  1:490698/1‑136 (MQ=255)                                                                                                                                    ctctATC‑TCccaggcgctgaagcgctcccggcgaacacctcccaggcgctcaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccctatacacaccgcga     <  2:238452‑M1/150‑142 (MQ=255)                                                                                                                                    cTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgcc                    >  1:370074‑M1/1‑9 (MQ=255)                                                                                                                                    cTCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgcc                    <  2:370074‑M1/135‑127 (MQ=255)                                                                                                                                    cTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGAATCTCGc     >  1:135058/1‑150 (MQ=255)                                                                                                                                     tCGATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccctctacaaacggcgcc    >  2:571782‑M1/1‑8 (MQ=255)                                                                                                                                       gATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaacatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccctatacacaccgcgacac  <  1:571782‑M1/150‑145 (MQ=255)                                                                                                                                       gATC‑TCccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgccctatacacaccgcgacac  >  1:182710‑M1/1‑6 (MQ=255)                                                                                                                                       gATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTGACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGAATCTCGCTCa  >  2:90985/1‑150 (MQ=255)                                                                                                                                             |                                                                                                                                                 CATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATC‑TCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGGTCACGAATCTCGCTCA  >  NC_002947/652646‑652929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.