New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4030306 =	55 (1.320)	8 (0.210)	8/244	3.1	13.4%	intergenic (+17/‑76)	PP_3553/PP_3554	AMP‑binding domain‑containing protein/acyl‑CoA dehydrogenase family protein
	?	NC_002947	4030337 =	54 (1.440)					intergenic (+48/‑45)	PP_3553/PP_3554	AMP‑binding domain‑containing protein/acyl‑CoA dehydrogenase family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGCCCGACTGCCCGCCCTGGCCGAA  >  NC_002947/4030191‑4030480                                                                                                                                                   |                                                                                                                                                ttCAAGGTGCCGAAGACCGTGGTGTTCTGCGAGCTGCCCAAGACCTAGACCGGCAAGATCCAGAAGTACGTGCTGCCCGACCTGGCCAAAGCCCTCTTACGCCATAGCCTCACCCCTTCACGCGCAGCCCCCGCCTGCCCCCTAACATTc                                                                                                                                              >  2:189920/1‑150 (MQ=255)   cAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCac                                                                                                                                            <  1:965768/150‑2 (MQ=255)   cAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAg                                                                                                                                            >  1:704183/1‑150 (MQ=255)    aaGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAgc                                                                                                                                           <  1:71162/150‑1 (MQ=255)             aaGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACGCGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCCAAGCCCGCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCa                                                                                                                                  >  1:82878/1‑150 (MQ=255)                   gtggtgTTCGGCGAGCTGCCCAAGACCTCGAGAGGCGAGATGCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAccctc                                                                                                                            <  2:82878/150‑1 (MQ=255)                   gtggtgTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAccctc                                                                                                                            <  2:614327/150‑1 (MQ=255)                     ggtgTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTATGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAccctccc                                                                                                                          <  1:893925/150‑1 (MQ=255)                           cGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAc                                                                                                                                <  2:40895/138‑1 (MQ=255)                           cGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAc                                                                                                                                >  1:40895/1‑138 (MQ=255)                                 gCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCaa                                                                                                              <  2:339772/150‑1 (MQ=255)                                     cccAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAccctccc                                                                                                                          <  2:729231/134‑1 (MQ=255)                                     cccAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAAccctccc                                                                                                                          >  1:729231/1‑134 (MQ=255)                                       cAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCAAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTg                                                                                                        >  1:1006666/1‑150 (MQ=255)                                        aaGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGc                                                                                                       >  2:486601/1‑150 (MQ=255)                                        aaGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGc                                                                                                       <  1:111914/150‑1 (MQ=255)                                             cTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGc                                                                                                          >  1:578758/1‑142 (MQ=255)                                             cTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGc                                                                                                          <  2:578758/142‑1 (MQ=255)                                              tCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGa                                                                                                 >  1:702281/1‑150 (MQ=255)                                                gACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCaa                                                                                                              <  1:429655/135‑1 (MQ=255)                                                gACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCaa                                                                                                              >  2:429655/1‑135 (MQ=255)                                                gACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGAcc                                                                                               <  2:134892/150‑1 (MQ=255)                                                 aCCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCa                                                                                              <  2:904266/150‑1 (MQ=255)                                                         gATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTcc                                                                                      <  1:742385/150‑1 (MQ=255)                                                           tCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTAt                                                                                                                   >  1:361100/1‑119 (MQ=255)                                                           tCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTAt                                                                                                                   <  2:361100/119‑1 (MQ=255)                                                             cAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCa                                                                                                                                             >  2:461575/1‑91 (MQ=255)                                                             cAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCa                                                                                                                                             <  1:461575/91‑1 (MQ=255)                                                              aGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCTCCTGAAGATTCATCGCTCGCCCAGCCCGCCCTGACTAGGGCAATATCGGCCGAGGACCACTTATTCCGcccc                                                                                 >  2:216613/1‑150 (MQ=255)                                                              aGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGcccc                                                                                 >  2:580083/1‑150 (MQ=255)                                                                  gTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTg                                                                             <  1:486601/150‑1 (MQ=255)                                                                       tgctgcGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGa                                                                        >  1:443315/1‑150 (MQ=255)                                                                        gctgcGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGAc                                                                       >  2:9016/1‑150 (MQ=255)                                                                                aCCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTACCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCtt                                                               >  1:768417/1‑150 (MQ=255)                                                                                     gCCAAAGCCGTCTGATGCCATACCGGCTCCCCTTCAGGTGCAGCACACGGCTGCGGCTGAAGATTCAGCGCTCGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACACGCGCTTCGTcc                                                          >  2:428081/1‑150 (MQ=255)                                                                                     gCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTc                                                                                       <  1:599170/121‑1 (MQ=255)                                                                                     gCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATCCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTc                                                                                       >  2:599170/1‑121 (MQ=255)                                                                                              ctctGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACg                                                 >  1:259362/1‑150 (MQ=255)                                                                                              ctctGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACg                                                 >  2:60773/1‑150 (MQ=255)                                                                                                  gATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGtt                                             >  2:454657/1‑150 (MQ=255)                                                                                                   aTGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTc                                            >  1:715900/1‑150 (MQ=255)                                                                                                     gCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCaa                                          >  1:132711/1‑150 (MQ=255)                                                                                                     gCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCaa                                          <  2:1006666/150‑1 (MQ=255)                                                                                                     gCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCCGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCaa                                          <  2:704183/150‑1 (MQ=255)                                                                                                        aTAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAaga                                                                                                            >  2:213379/1‑81 (MQ=255)                                                                                                        aTAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAaga                                                                                                            <  1:213379/81‑1 (MQ=255)                                                                                                          aGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCtt                                     <  2:132711/150‑1 (MQ=255)                                                                                                                  cccTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCtg                             >  1:369434/1‑150 (MQ=255)                                                                                                                    cTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCtgtg                           >  1:717325/1‑150 (MQ=255)                                                                                                                      tCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTggg                         <  2:369434/150‑1 (MQ=255)                                                                                                                        aGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGcc                       <  2:702281/150‑1 (MQ=255)                                                                                                                         ggCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGccc                      <  1:9016/150‑1 (MQ=255)                                                                                                                                 acacGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGCCCGACTgccc              >  2:8199/1‑150 (MQ=255)                                                                                                                                     ggCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGCCCGACTgcccgccc          <  1:580083/150‑1 (MQ=255)                                                                                                                                             cTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCTATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTgg                          <  1:263607/126‑1 (MQ=255)                                                                                                                                             cTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCTATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTgg                          >  2:263607/1‑126 (MQ=255)                                                                                                                                             cTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGCCCGACTGCCCGCCCTGGCCGaa  >  2:543996/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                TTCAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGTGCTGCGCGACCGGGCCAAAGCCCTCTGATGCCATAGCCGCTCCCCTTCAGGCGCAGCACACGGCTGCGCCTGAAGATTCAGCGCACGCCCAACCCTCCCTTACTATTGCAAGAGCTGCCGATGACCACTTATTCCGCCCCCCTGCGCGACATGCGCTTCGTCCTGCATGACGTGTTCAACGCTTCGGGCCTGTGGGCCCGACTGCCCGCCCTGGCCGAA  >  NC_002947/4030191‑4030480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.