| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5162612 = | 53 (1.190) | 11 (0.260) | 10/264 | 3.3 | 18.5% | intergenic (+87/+114) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| ? | NC_002947 | 5162708 = | 46 (1.070) | intergenic (+183/+18) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGCCGAGCTGGTATT > NC_002947/5162563‑5162857 | ccGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACa < 1:864215/150‑1 (MQ=255) cGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAg < 2:834227/150‑1 (MQ=255) ccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGcc > 2:471347/1‑150 (MQ=255) tCCGGCGTTTCCCGTTCCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTTCCCGCTCCCACCGTATCACCACAGACTTTGAGAACTGTGCTTTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtga < 1:340205/150‑1 (MQ=38) ccGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgat < 1:558930/150‑1 (MQ=255) cGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGGGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAAt < 2:818338/150‑1 (MQ=255) ttcttTTTTGCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCTCAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCCCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTgc < 1:1022610/150‑1 (MQ=255) gTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATc > 1:143732/1‑150 (MQ=255) tCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATca < 2:143732/150‑1 (MQ=255) tgtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACt > 1:242910/1‑150 (MQ=255) tgAAACGCGCCGGCCCCTCCGCGCGCTTCCCCACCCCCCCAGTATCACCACAGCCCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTAc < 1:1025346/150‑1 (MQ=38) aaaTGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGAGCTTGCGCAGAATCACACTACCa > 1:947483/1‑150 (MQ=255) gcCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGaa < 1:779929/150‑1 (MQ=255) cGGCCCCTGCGCGGGCTTGCCCGCTCCCACAGTATCACCACAAACCCTATGACCTGTGCTGTACCGGTGGGAGGGGGCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATa < 2:676071/150‑1 (MQ=38) cccTTCGCGGGCTTGCCCGCTCCCACAGTATCCCCACAGACCTTGAGAACGGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATAcccc > 1:34899/1‑150 (MQ=255) ttGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg > 2:673821/1‑150 (MQ=17) cccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc > 1:313680/1‑150 (MQ=255) ccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAAt > 2:681990/1‑112 (MQ=255) ccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAAt < 1:681990/112‑1 (MQ=255) ccGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 2:749933/1‑150 (MQ=255) cTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAaca < 2:643222/150‑1 (MQ=255) acaGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgatg < 1:355562/84‑1 (MQ=255) acaGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgatg > 2:355562/1‑84 (MQ=255) aTCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGa < 2:647933/150‑1 (MQ=255) caccacAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGc < 2:242910/150‑1 (MQ=255) ccacAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCt > 2:648504/1‑150 (MQ=255) acaGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCttt > 1:283854/1‑150 (MQ=255) caGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTg < 1:749933/150‑1 (MQ=255) ccTTAAGCACTGTGCTGTAGTGGTTGAAGCGGGCAAGTCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCa < 2:162713/150‑1 (MQ=255) cTGTGCTGTAACTGTGGGCGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCt > 2:632491/1‑150 (MQ=255) gtgatacTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTgg < 1:760796/127‑1 (MQ=255) gtgatacTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTgg > 2:760796/7‑133 (MQ=255) tGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATTGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACa > 2:969815/1‑150 (MQ=255) tGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg < 2:921498/125‑1 (MQ=255) tGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg > 1:921498/1‑125 (MQ=255) tttccTGTGTGATCGGGCAAGCCCTCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAg < 1:1069325/147‑1 (MQ=255) gTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt < 1:409244/128‑1 (MQ=255) gTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt > 2:409244/1‑128 (MQ=255) gTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAg > 1:272348/1‑150 (MQ=255) tACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAgg > 2:106351/1‑150 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTgg < 2:604119/140‑1 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTgg > 1:604119/1‑140 (MQ=255) gggCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCa < 2:272348/150‑1 (MQ=255) ggCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAc < 1:106351/150‑1 (MQ=255) gCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg > 1:14329/1‑141 (MQ=255) gCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg < 2:14329/141‑1 (MQ=255) gCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAcc < 1:569677/150‑1 (MQ=255) gCCCGCGAAGGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACa > 1:702474/1‑129 (MQ=255) gCCCGCGAAGGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACa < 2:702474/129‑1 (MQ=255) gCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGAcc > 1:763597/1‑150 (MQ=255) agGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATTGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGCCGAgtt < 1:969815/150‑3 (MQ=255) gTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGCCGAGCTGGTAt < 1:471347/150‑1 (MQ=255) tAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGCCGAGCTGGTAtt > 2:12714/1‑150 (MQ=255) | CCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCACCGACCCCGCCGAGCTGGTATT > NC_002947/5162563‑5162857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |